• Phosphatome.Net

Gene Aque_g33448.t1_3

Aque_g33448.t1_3
Species: A.queenslandica
Alias: Aque_g33448.t1_3
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Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: Cx5R-I
Family: Classic_PTP
Subfamily: R_Sponge_1
Protein domain

Protein domains of Aque_g33448.t1_3.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Fn3 Aque_g33448.t1_3.AA FN3 232-310 17 3.7e-07 31.04 SMART 1-69 (69) Show / Hide 
Range on Protein: 232-310
Range on HMM: 1-69/69
Sequence Identity: 17% (17 aa)

ATAPTS---LTEVNKTTT------TITVNWTALDSSDADGYVVNVTSDTDTVQTVQVEGSSNNTITLNGLRVE----TAYSITVRAY---QQLLG
  .|.    |. .. |.|      ..|. |..       ||.                       |. ||.      | |...|||.   ..  |
PGPPPNPTHLRVTDVTSTSTSDWHSVTLSWKPP----IVGYR----------------------YTVTGLKPGQYPWTEYEFRVRAVNGNDAGEG
Fn3 Aque_g33448.t1_3.AA FN3 327-414 20 4.4e-12 47.38 SMART 1-69 (69) Show / Hide 
Range on Protein: 327-414
Range on HMM: 1-69/69
Sequence Identity: 20% (21 aa)

PSPVTS---LSVSNVSTT------GITVKWTIPSSDNYVTYYTVSYTPSCPELSSVNERVSVGPHQSTTTYSYTLIGLYSG----MNYTITVRAGNV--L
|.|..    |.|..|..|       .|..|. |     ...|.                             ||. ||  |     .|...||| |    
PGPPPNPTHLRVTDVTSTSTSDWHSVTLSWKPP-----IVGYR-----------------------------YTVTGLKPGQYPWTEYEFRVRAVNGNDA

GGS
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GEG
Sequence
Name Sequence Type Origin Length Description Download
Aque_g33448.t1_3.AA Protein None 632 None Fasta, JSON
Aque_g33448.t1_3.NA RNA None 1896 None Fasta, JSON