Species: A.queenslandica
Alias: Aque_g3548.t1
External Links:

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: Cx5R-I
Family: Myotubularin
Subfamily: MTMR1
Protein domain

Protein domains of Aque_g3548.t1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
GRAM Aque_g3548.t1.AA GRAM 9-55 27 6.8e-07 27.72 Pfam 34-78 (78) Show / Hide
Range on Protein: 9-55
Range on HMM: 34-78/78
Sequence Identity: 27% (13 aa)

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Aque_g3548.t1.AA Myotub-related 155-191 48 1.1e-11 46.54 Pfam 1-37 (121) Show / Hide
Range on Protein: 155-191
Range on HMM: 1-37/121
Sequence Identity: 48% (18 aa)

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Name Sequence Type Origin Length Description Download
Aque_g3548.t1.AA Protein None 193 None Fasta, JSON
Aque_g3548.t1.NA RNA None 579 None Fasta, JSON