• Phosphatome.Net

Gene g17127.t1

g17127.t1
Species: A.queenslandica
Alias: g17127.t1
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: Cx5R-I
Family: OCA
Subfamily: OCA
Protein domain

Protein domains of g17127.t1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase g17127.t1.AA Subfamily.N14.PD 165-216 29 3.8e-07 20.2 In-house 180-234 (275) Show / Hide 
Range on Protein: 165-216
Range on HMM: 180-234/275
Sequence Identity: 29% (16 aa)

QQYMDYLEYSKPVFSGMLKLLL-SHEENLPVLIHCVYGKDRTGVLVA--LILDCI
......||  . |   . .    ..|.. |||.||  |  |||||.   |.. ..
kgflsfLeevqsvrrktnsevesvkeskPPvlvhCsaGvGrtGvlilsdlliatl
Phosphatase g17127.t1.AA Family.OCA.PD 169-212 43 4.5e-08 23.6 In-house 71-113 (165) Show / Hide 
Range on Protein: 169-212
Range on HMM: 71-113/165
Sequence Identity: 43% (19 aa)

DYLEYSKPVFSGMLKLLLShEENLPVLIHCVYGKDRTGVLVALI
|  | .. .   .||.||  ..| ||||||  ||.|||..|. .
dlveieeellkrvlkilld-vdnypvlihcnkGkhrtglvvgcl
Phosphatase g17127.t1.AA Subfamily.OCA.PD 169-212 43 4.5e-08 23.6 In-house 71-113 (165) Show / Hide 
Range on Protein: 169-212
Range on HMM: 71-113/165
Sequence Identity: 43% (19 aa)

DYLEYSKPVFSGMLKLLLShEENLPVLIHCVYGKDRTGVLVALI
|  | .. .   .||.||  ..| ||||||  ||.|||..|. .
dlveieeellkrvlkilld-vdnypvlihcnkGkhrtglvvgcl
Phosphatase g17127.t1.AA Subfamily.N3.PD 188-213 42 8.1e-06 15.8 In-house 190-215 (261) Show / Hide 
Range on Protein: 188-213
Range on HMM: 190-215/261
Sequence Identity: 42% (11 aa)

HEENLPVLIHCVYGKDRTGVLVALIL
. .. ||..||  | .|||||..| .
sgkeePvvvhCsaGigrtGvlillet
Sequence
Name Sequence Type Origin Length Description Download
g17127.t1.AA Protein None 300 None Fasta, JSON
g17127.t1.NA RNA None 900 None Fasta, JSON