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Gene Aque_c12601

Aque_c12601
Species: A.queenslandica
Alias: Aque_c12601
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: HAD
Family: FCP
Subfamily: DULLARD
Protein domain

Protein domains of Aque_c12601.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase Aque_c12601.AA Subfamily.DULLARD.PD 1-35 80 1.2e-18 56.1 In-house 138-172 (172) Show / Hide 
Range on Protein: 1-35
Range on HMM: 138-172/172
Sequence Identity: 80% (28 aa)

DNAIPITSWFSDPLDTDLLDLLPFLDSLRFTQDVR
||||||.||.||| ||.||.||||||.||||.|||
dnaipikswisdpsdtallnllPfldalrftkdvr
Phosphatase Aque_c12601.AA Subfamily.SCP.PD 1-34 58 5.9e-13 37.5 In-house 129-162 (163) Show / Hide 
Range on Protein: 1-34
Range on HMM: 129-162/163
Sequence Identity: 58% (20 aa)

DNAIPITSWFSDPLDTDLLDLLPFLDSLRFTQDV
|||.|..|||.|. ||.||||||.|..|. ..||
dnavpveswfddeedtelldllplleelskvedv
Phosphatase Aque_c12601.AA Family.FCP.PD 1-35 62 1.9e-12 36.2 In-house 130-164 (164) Show / Hide 
Range on Protein: 1-35
Range on HMM: 130-164/164
Sequence Identity: 62% (22 aa)

DNAIPITSWFSDPLDTDLLDLLPFLDSLRFTQDVR
||||...|...|| ||.||||||||.||....|||
dnaikvksfkedpkDteLldLlpfleslakeedvr
Phosphatase Aque_c12601.AA NIF 1-35 44 5.9e-12 45.45 Pfam 143-189 (189) Show / Hide 
Range on Protein: 1-35
Range on HMM: 143-189/189
Sequence Identity: 44% (21 aa)

DNAIPITS-WFS-----D-PLD--TDLLDLLPFL-DSLR-FT-QDVR
||.|||.. |..     | | |  . |||||||| ..|. .  .|||
DNGIPIPPYWYGYHDDDDSPDDFWNELLDLLPFLIEYLALQCLDDVR
Phosphatase Aque_c12601.AA Subfamily.HSPC129.PD 1-35 57 5.4e-11 31.3 In-house 130-164 (164) Show / Hide 
Range on Protein: 1-35
Range on HMM: 130-164/164
Sequence Identity: 57% (20 aa)

DNAIPITSWFSDPLDTDLLDLLPFLDSLRFTQDVR
.| ||| |||.|  |..||.|||||..|  ..|||
enGipieswfadendsellkllpfleklaekedvr
Phosphatase Aque_c12601.AA Group.HAD.PD 1-35 40 2.1e-09 26.5 In-house 154-190 (190) Show / Hide 
Range on Protein: 1-35
Range on HMM: 154-190/190
Sequence Identity: 40% (15 aa)

DNAIPITSWFSDPLDTDLLDLLPFLDSL--RFTQDVR
.||..| ....|.||. ||.|.|.|...  ||..||.
enalmigdfiddildaellglipdlenidvrfgkdvg
Sequence
Name Sequence Type Origin Length Description Download
Aque_c12601.AA Protein None 48 None Fasta, JSON
Aque_c12601.NA RNA None 144 None Fasta, JSON
Aque_c12601.AA.PD_1-35 Protein Phosphatase Domain None 35 None Fasta, JSON