Gene g30195.t1
g30195.t1
Classification
Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.
Protein domain
Protein domains of g30195.t1.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.
Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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Phosphatase | g30195.t1.AA | Subfamily.PPP5C.PD | 52-175 | 26 | 4.9e-06 | 15.3 | In-house | 99-222 (346) | Show / Hide |
Range on Protein: 52-175 Range on HMM: 99-222/346 Sequence Identity: 26% (33 aa) KGRRLLVVGDVHGCYDELVQLLDKAGGRDPGVLVVFVGDVCNKGPLNVESI------RLVREVGGYCVRGNHDEICLLEWLKHSEgaEpLSDKFSW-LSR ..... | ||.|| . .|. .... | . .| ||. ..| || | .|. . ||||. . . . .. ||.. . | .| etkkitvCgdihgqfyDllnifelnGlpseenpylfngDfvdrGsfsveviltllgfkllypnhfflsrGnhesdnmnklyGfeg--e-vkakytekvad LSKEEMDWyfeLPFSiHFPSREVLVIHAGLV .| ||.. | .|||.| || lftevfnw---lPla-hvinekvlvvhGGlf |
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Phosphatase | g30195.t1.AA | Family.PPP.PD | 56-197 | 24 | 7.8e-18 | 54.5 | In-house | 97-233 (349) | Show / Hide |
Range on Protein: 56-197 Range on HMM: 97-233/349 Sequence Identity: 24% (36 aa) LLVVGDVHGCYDELVQLLDKAGGRDPGVLVVFVGDVCNKGPLNVESIRLV------REVGGYCVRGNHDEICLLEWLKHSEgaePLSDKF---SWLSRLS . |.||.||..|.|..|.|. | .. ..|.||....|. .|| | |. . ...||||.. .. . . | . .|. . ..| . itvcGDihGqfdDLlrlfdinglppaenkylFlGDyVDRGkfsvEvilllfalkllypsrffllRGnhEsrsvnkvygfye---evkskykkgeeiyelf KEEMDWyfeLPFSIHFPsREVLVIHAGLVPgvpieeqSHHDLLHLRNVTFD | ..| ||.. ...|..| || | ....| ..|.. qevFnw---LPlaalid-ekilcvhGGlsp-------eltsldqirkierp |
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Phosphatase | g30195.t1.AA | Group.PPP.PD | 56-197 | 24 | 7.8e-18 | 54.5 | In-house | 97-233 (349) | Show / Hide |
Range on Protein: 56-197 Range on HMM: 97-233/349 Sequence Identity: 24% (36 aa) LLVVGDVHGCYDELVQLLDKAGGRDPGVLVVFVGDVCNKGPLNVESIRLV------REVGGYCVRGNHDEICLLEWLKHSEgaePLSDKF---SWLSRLS . |.||.||..|.|..|.|. | .. ..|.||....|. .|| | |. . ...||||.. .. . . | . .|. . ..| . itvcGDihGqfdDLlrlfdinglppaenkylFlGDyVDRGkfsvEvilllfalkllypsrffllRGnhEsrsvnkvygfye---evkskykkgeeiyelf KEEMDWyfeLPFSIHFPsREVLVIHAGLVPgvpieeqSHHDLLHLRNVTFD | ..| ||.. ...|..| || | ....| ..|.. qevFnw---LPlaalid-ekilcvhGGlsp-------eltsldqirkierp |
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Phosphatase | g30195.t1.AA | Metallophos | 54-237 | 18 | 1.8e-15 | 58.83 | Pfam | 1-124 (124) | Show / Hide |
Range on Protein: 54-237 Range on HMM: 1-124/124 Sequence Identity: 18% (35 aa) RRLLVVGDVHGCYDELVQLLDKAGGRDPGVLVVFVGDVCNKGPLNVESIR------LVREVGGYCVRGNHDEI-CLLEWLKHSEGAEPLSDKFSWLSRLS |.|..||.||.||.| ..| ... . . .|.|.||. . ||. | |. . . . |.|||||| . ... | MRILHCGDIHGQYDDL-NRLFEII-E-KPDFVIFTGDYVDRGPWSDECIWLLFCYKMNYPGPVYWVRGNHDYMHGNDFYGFY-E--------------ND KEEMDWYFELPFSIHFPSREVLVIHAGLVPGVPIEEQSHHDLLHLRNVTFDLRTLTFSSERGGAYQEPHPQPWAQTWIGPDHVYFGHDAIR . | | .. . .|. |... .. |.| | .||. . W-MWWWWF-WMPLA-LDDWKILCMHGPP---------------------------------------------FCK-NGVDYVIRGHTHVP |
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Phosphatase | g30195.t1.AA | Subfamily.PPP_Nematode_4.PD | 57-176 | 27 | 2.2e-09 | 26.7 | In-house | 31-149 (271) | Show / Hide |
Range on Protein: 57-176 Range on HMM: 31-149/271 Sequence Identity: 27% (33 aa) LVVGDVHGCYDELVQLLDKAgGRDPGVLVVFVGDVCNKGPLNVESIRLVRE------VGGYCVRGNHDEICLLEWLKH-SEGAEPLSDKFSWLsrlskeE ||||.|. ...|..|.| || | .||.|| ..|| ..| . |. . .||||. . |.. .. . .|| kvvgdlhaqfqdlirlfdll-grvpeeklvflgdyvdrgpqgievlillfclkiryrdrivllrgnheiasvnkkygfyeecvtkygeelwad------f MDWYFELPFSIhFPSREVLVIHAGLVP .| . .. || .| || | qrcfnrlpisa-liakkvlcmhgglsp |
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Phosphatase | g30195.t1.AA | Subfamily.PPP_Nematode_5.PD | 57-176 | 29 | 6.2e-09 | 24.9 | In-house | 31-149 (274) | Show / Hide |
Range on Protein: 57-176 Range on HMM: 31-149/274 Sequence Identity: 29% (35 aa) LVVGDVHGCYDELVQLLDKAgGRDPGVLVVFVGDVCNKGPLNVESIRL------VREVGGYCVRGNHDEICLLewlKHSEGAEPLSDKFSwlSRLSKEEM .|||.|| .|.|...... |. | | .|.|| ..|. .| . | . .||||. . || | |.. ..| |. | . || tivGdihGqlddllrifnav-GaapkvqylflGdyvdrGakslevslllfslkiaypkkvhllrgnhevkkin---klygfkeelkkkrq--eslykkfn DWYFELPFSIHFpSREVLVIHAGLVP |. . |. .| .| |. | dvfselplcarv-skrilcmhGGisp |
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Phosphatase | g30195.t1.AA | Subfamily.PPP1C.PD | 56-177 | 26 | 1.2e-08 | 24.5 | In-house | 30-150 (271) | Show / Hide |
Range on Protein: 56-177 Range on HMM: 30-150/271 Sequence Identity: 26% (33 aa) LLVVGDVHGCYDELVQLLDKAgGRDPGVLVVFVGDVCNKGPLNVESIRLVR------EVGGYCVRGNHDEICLLEWLKHSEGAeplsdKFSWLSRLSKEE | .|||.|| | .|..|..|. | | .|.|| ..| .|.| |. . . .||||. . . . . |. .| | .| lkivGdihGqyadllrlfekg-gfppesnylflGdyvdrGkqsletivlllaykikypenffllrGnhecasinriygfydec-----krryniklwktf MDWYFELPFSIHFpSREVLVIHAGLVPG . || . . .....| || | vdcfnclpvaaiv-dekifcvhGGlspd |
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Phosphatase | g30195.t1.AA | Subfamily.PPP3C.PD | 56-178 | 24 | 2.3e-08 | 23.3 | In-house | 30-151 (292) | Show / Hide |
Range on Protein: 56-178 Range on HMM: 30-151/292 Sequence Identity: 24% (31 aa) LLVVGDVHGCYDELVQLLDKaGGRDPGVLVVFVGDVCNKGPLNVESI------RLVREVGGYCVRGNHDEICLLEWLKHSEGaepLSDKFSwlSRLSKEE . |.||.|| . .|..|.. || .|.|| ..| .| . .. . . .||||. .| |... | . |.|.. .. |. itviGdihGqfydllklfev-gGkpastkylflGdyvdrGyfsiecvlylyalkiaypsrlfllrGnhecrhlteyftfkee---vkikys--eevyeal MDWYFELPFSIHFpSREVLVIHAGLVPGV . ||.. . .. | .| || | . mesfdslplaall-nqkflcvhGGlspei |
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Phosphatase | g30195.t1.AA | Subfamily.PPP_Nematode_6.PD | 57-122 | 33 | 3.1e-08 | 22.8 | In-house | 31-101 (272) | Show / Hide |
Range on Protein: 57-122 Range on HMM: 31-101/272 Sequence Identity: 33% (24 aa) LVVGDVHGCYDELVQLLDKaGGRDPGVLVVFVGDVCNKGPLNVESIRLVRE------VGGYCVRGNHDEICL | ||.|| | .|..|.|| || | . .|.|| ..| ..| | |. . .||||. . kvcGdihGqysdllrlfdk-ggfppdanylflGdyvdrGrqslevillllaykvkfpnnffllrGnheceai |
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Phosphatase | g30195.t1.AA | Subfamily.PPP2C.PD | 56-105 | 36 | 1.6e-07 | 20.6 | In-house | 30-78 (271) | Show / Hide |
Range on Protein: 56-105 Range on HMM: 30-78/271 Sequence Identity: 36% (18 aa) LLVVGDVHGCYDELVQLLdKAGGRDPGVLVVFVGDVCNKGPLNVESIRLV . |.||||| . .|..|. . ||. | .|.|| ..| ||.. |. vtvcgdvhgqfhdllelf-riggkspdtnylfmgdyvdrgyysvetvtll |
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Phosphatase | g30195.t1.AA | Subfamily.PPP4C.PD | 57-105 | 35 | 6.8e-07 | 18.5 | In-house | 31-78 (271) | Show / Hide |
Range on Protein: 57-105 Range on HMM: 31-78/271 Sequence Identity: 35% (17 aa) LVVGDVHGCYDELVQLLDKaGGRDPGVLVVFVGDVCNKGPLNVESIRLV | ||.|| . .|..|.. || | .|.|| ..| ||.. |. tvcgdihgqfydllelfkv-ggdvpetnylflgdfvdrgfysvetflll |
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Phosphatase | g30195.t1.AA | Subfamily.PPP7C.PD | 54-174 | 26 | 8.8e-07 | 17.6 | In-house | 68-191 (338) | Show / Hide |
Range on Protein: 54-174 Range on HMM: 68-191/338 Sequence Identity: 26% (34 aa) RRLLVVGDVHGCYDELVQLLDKAGGRDPGVLVVFVGDVCNKGPLNVES------IRLVREVGGYCVRGNHDEICLLewLKHSEGAEpLSDKF-SWLSRLS ... | ||.|| |.|. .| | | . || || ..| || . || | ||||.. | |.. | ...|. . ... kevtvcgdlhgklddlllilyknGlpsaenpyvfnGdfvdrGkesveillilfalllvypkevylnrGnhedyiln--lryGfike-veskykvhgkkil KEEMDWYFELPFSIHFpSREVLVIHAGL . | . ||.. ...|..| |. rlledvfawlplatli-dekilivhGGi |
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Phosphatase | g30195.t1.AA | Subfamily.PPP6C.PD | 57-103 | 35 | 5.2e-06 | 15.6 | In-house | 31-76 (271) | Show / Hide |
Range on Protein: 57-103 Range on HMM: 31-76/271 Sequence Identity: 35% (16 aa) LVVGDVHGCYDELVQLLdKAGGRDPGVLVVFVGDVCNKGPLNVESIR |.||.|| . .|..|. ..||. | ||.|| ..| .|.. tvcgdihgqfydleelf-rtggqvpdtsyvflgdfvdrgyysletft |
Sequence
Name | Sequence Type | Origin | Length | Description | Download |
---|---|---|---|---|---|
g30195.t1.AA | Protein | None | 293 | None | Fasta, JSON |
g30195.t1.NA | RNA | None | 879 | None | Fasta, JSON |
g30195.t1.AA.PD_54-237 | Protein Phosphatase Domain | None | 184 | None | Fasta, JSON |