• Phosphatome.Net

Gene F20B6.6

F20B6.6
Species: C.elegans
Alias: F20B6.6
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: Cx5R-I
Family: Classic_PTP
Subfamily: N_Nematode_6
Protein domain

Protein domains of F20B6.6.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase F20B6.6.AA Subfamily.N_Nematode_6.PD 70-135 66 1.1e-31 99.6 In-house 1-66 (253) Show / Hide 
Range on Protein: 70-135
Range on HMM: 1-66/253
Sequence Identity: 66% (44 aa)

QLTKEYKAVGNIFPDSECTAFLKFKDLNRYPNIQCWDRGRFTLAGDENFYIHANFVKICTKPEREI
.|.||||...|. ..||.||||||||.|||.||||.|.||..||.||.||||||.|||.|||.| |
glkkeykdspneaseseataflkfkdrnrytniqCcdagrlkladdedfyihanlvkistkprrli
Phosphatase F20B6.6.AA Subfamily.N_Nematode_1.PD 71-135 31 2.9e-10 29.2 In-house 2-70 (265) Show / Hide 
Range on Protein: 71-135
Range on HMM: 2-70/265
Sequence Identity: 31% (22 aa)

LTKEYKAVGNIFPDSECTAFLKFKD--LNRYPNIQCWDRGRFTL--AGDENFYIHANFVKICTKPEREI
| .|..|. .  . .. .|| . ..   ||| ...| |..|  |   .  . |||||.| . |.| | |
lrdefralkkfndeekvkafkeaqeadknrykdvgcldknrvklaeeplpsdyihanyvgtptnpkrfi
Phosphatase F20B6.6.AA Subfamily.N_Nematode_5.PD 71-127 27 4e-09 25.4 In-house 2-59 (258) Show / Hide 
Range on Protein: 71-127
Range on HMM: 2-59/258
Sequence Identity: 27% (16 aa)

LTKEYKAVGNIFPDS-ECTAFLKFKDLNRYPNIQCWDRGRFTLAGDENFYIHANFVKI
| .|.. . .. |.. .|.|| | .. ||...... |  |  |. ... ||.|. .|.
lktefeklaslkpnketckafeknlkknrskdvkilDetrVkltdeddsYinaskikl
Phosphatase F20B6.6.AA Subfamily.N13.PD 72-130 31 6.5e-08 21.7 In-house 3-62 (259) Show / Hide 
Range on Protein: 72-130
Range on HMM: 3-62/259
Sequence Identity: 31% (18 aa)

TKEYKAVGNIFPDSECTAFLK--FKDLNRYPNIQCWDRGRFTLAGDENfYIHANFVKICTK
..|.| . .. |  .|.   |   || ||| |.  .|. | .| .. . || |...|.   
aeefkelrelkpldtcevgkkkenkdknryrnvlPydetrvklgdegg-yinaslikvpvg
Phosphatase F20B6.6.AA Y_phosphatase 93-133 30 1.4e-07 27.74 Pfam 1-46 (243) Show / Hide 
Range on Protein: 93-133
Range on HMM: 1-46/243
Sequence Identity: 30% (14 aa)

FKDLNRYPNIQCWDRGRFTLA----GDENFYIHANFVKI-CTKPER
 |. |||..| | |. |  |     ..  .||.||....  ..| .
NKEKNRYKDIPCYDHTRVKLQPIPGDEDSDYINANYIDGPYWNPKA
Phosphatase F20B6.6.AA Subfamily.N_Nematode_4.PD 81-127 36 2e-07 19.9 In-house 14-62 (264) Show / Hide 
Range on Protein: 81-127
Range on HMM: 14-62/264
Sequence Identity: 36% (17 aa)

IFPDSECTAFLKFKDLNRYPNIQCWDRGRFTLAGD--ENFYIHANFVKI
|.   .|. | .|.||| .| | |  |  |     .| ||||.....  
appnvtasaseknsdknryadilcidetrvvlknrdpdndyihaswmrm
Phosphatase F20B6.6.AA Subfamily.R_Nematode_2.PD 92-135 32 1.3e-06 17.2 In-house 28-72 (261) Show / Hide 
Range on Protein: 92-135
Range on HMM: 28-72/261
Sequence Identity: 32% (14 aa)

KFKDLNRYPNIQCWDRGRFTLAG-DENFYIHANFVKICTKPEREI
|| .|||.. | ....      ..   ||||.|   ..|.| |  
lpkdkhRypdvPCkpetavevivdgkrvpihanwvptagnpkrfi
Phosphatase F20B6.6.AA Subfamily.N1.PD 91-128 30 4e-06 15.8 In-house 26-63 (268) Show / Hide 
Range on Protein: 91-128
Range on HMM: 26-63/268
Sequence Identity: 30% (11 aa)

LKFKDLNRYPNIQCWDRGRFTLAGDENFYIHANFVKIC
. ..|||| ... .|  | .|  ... || |..|..  
penrglnryrdvspydhsrikleradvdyinaslvele
Phosphatase F20B6.6.AA Subfamily.N3.PD 96-127 41 6.1e-06 14.9 In-house 29-60 (261) Show / Hide 
Range on Protein: 96-127
Range on HMM: 29-60/261
Sequence Identity: 41% (13 aa)

LNRYPNIQCWDRGRFTLAGDENFYIHANFVKI
||| .|  .|  | .|   |. || ||.|.. 
knryrdilpydatrvklkesetdyinanyvnm
Phosphatase F20B6.6.AA Subfamily.N_Choan_1.PD 74-132 29 9.1e-06 14.6 In-house 5-69 (262) Show / Hide 
Range on Protein: 74-132
Range on HMM: 5-69/262
Sequence Identity: 29% (19 aa)

EYKAVGNIFPDSECTAFL--KFKDLNRYPNIQCWDRGRFTLAG----DENFYIHANFVKICTKPE
||... .|  |. .||    . .  ||| ||  .| .| ...      .. || ||||.  ....
eyeklaeigvdntataskadenvlknrysnivayDatrvkvtpneenkntDyinanfvpgykgek
Sequence
Name Sequence Type Origin Length Description Download
F20B6.6.AA Protein None 145 None Fasta, JSON
F20B6.6.NA RNA None 435 None Fasta, JSON
F20B6.6.AA.PD_93-133 Protein Phosphatase Domain None 41 None Fasta, JSON