• Phosphatome.Net

Gene T13C2.4

T13C2.4
Species: C.elegans
Alias: T13C2.4
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: LMWPTP_SSU72
Family: Ssu72
Subfamily: Ssu72
Protein domain

Protein domains of T13C2.4.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase T13C2.4.AA Ssu72 5-197 48 1.2e-108 372.07 Pfam 1-214 (214) Show / Hide 
Range on Protein: 5-197
Range on HMM: 1-214/214
Sequence Identity: 48% (104 aa)

SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYEDIYADLTNKDLHL--YTQNGLLHMVDRNRRIKSRPQRFQA
|||.|.. |.||.||||||| .|||.|....||| |  |..|||..||||.|.|| |.|.||| || ..|  |  ||||||||| ||||||| .|.|.| 
SKLKFCTVCASNQNRSMEAHKVLKKAGYDVRSYGTGSHVRLPGPSIDKPNVYDFG-TPYDDIYNDLESQDEDLVNYTQNGLLHMLDRNRRIKWCPERWQD

--ETRE--FDIVLCLEERVFDQVVDFLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLE----------------RSEDFEEDIDQIITDLE
  .|    ||.| . |||.||.|...| .  ..   ||||||.|| || |||. ||.   |||..|.                 |||.|..|..|... .
WFCTERGKFDVVITCEERCFDAVCEDLMNRGQQLNQPVHVINVDIKDNHEEAIIGAKAICDLCQMLHDFAQKERQGWHQFCDEASEDWEDQIMEILHEWQ

ENNPKRNLLHTICFY
|..|.|..|...|||
EQHPHRPFLYCVCFY
Phosphatase T13C2.4.AA Family.Ssu72.PD 6-197 64 2.9e-98 314.8 In-house 2-191 (191) Show / Hide 
Range on Protein: 6-197
Range on HMM: 2-191/191
Sequence Identity: 64% (123 aa)

KLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGpTTYEDIYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETR
|||.||.||||.|||.||| .|||.|||..|||.|..||.|||..||||.|||| |||||||.||..|| .||||||||.|.|||||||..|.|||.|..
klriavvcssnqnrsleahkllkkkGfnvksyGtgsavklPGpsidkPnvyefg-ttyediykdlkekdkelytqnGllemldrnrrikkaPerfqeekk

EFDIVLCLEERVFDQVVDFLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNpKRNLLHTICFY
.|||||..||||.|.||. |... .|| .||||||.||.|||||||.|||....|.|.||.|||.|..||.|....||.. ||.|||...||
kfdivltveervydavvedlesreeksskpvhvinvdikdnaeeatlGaflilelaemleksedledeideileefeekt-krellhsvafy
Phosphatase T13C2.4.AA Subfamily.Ssu72.PD 6-197 64 2.9e-98 314.8 In-house 2-191 (191) Show / Hide 
Range on Protein: 6-197
Range on HMM: 2-191/191
Sequence Identity: 64% (123 aa)

KLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGpTTYEDIYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETR
|||.||.||||.|||.||| .|||.|||..|||.|..||.|||..||||.|||| |||||||.||..|| .||||||||.|.|||||||..|.|||.|..
klriavvcssnqnrsleahkllkkkGfnvksyGtgsavklPGpsidkPnvyefg-ttyediykdlkekdkelytqnGllemldrnrrikkaPerfqeekk

EFDIVLCLEERVFDQVVDFLNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNpKRNLLHTICFY
.|||||..||||.|.||. |... .|| .||||||.||.|||||||.|||....|.|.||.|||.|..||.|....||.. ||.|||...||
kfdivltveervydavvedlesreeksskpvhvinvdikdnaeeatlGaflilelaemleksedledeideileefeekt-krellhsvafy
Phosphatase T13C2.4.AA Group.LMWPTP_SSU72.PD 7-197 40 3.4e-55 174.4 In-house 1-161 (163) Show / Hide 
Range on Protein: 7-197
Range on HMM: 1-161/163
Sequence Identity: 40% (75 aa)

LRFAVSCSSNMNRSMEAHGILKKrgfniesygsgnQVKMPGPTVDKpNCYEFGPTTYEDIYADLTNKDLHLYTQNGLLHMVDrnrrikSRPQRFQAET-R
|.... |..|..||.||. .|||            .||.||.. || |...|| |||||.| .|...| .||.|||||.| |.||..||.|. ..||..|
lkvlfVClgNicRSpeAeavlkk------------lvklpglssdk-nvdsfgtttYedgysplkradkelykqnGllrmld------hrprqfqeedfe

EFDIVLCLEERVFDQVVDFLNRSVGKSGnpvhvinidieDNAEEATFGAFFVADLCEKLERSEDFEEDIDQIITDLEENNpKRNLLHTICFY
...||..|.|...|... .||            ||||||..||| . .|.|..|..||.||..|.....||.. |...||. .||       
kFDyiltmdernldevkedlesrekksn-----------dnaeeallGafqisklaeiiedpedleeyydeeleeFeesy-kqlvlhckaFy
Sequence
Name Sequence Type Origin Length Description Download
T13C2.4.AA Protein None 197 None Fasta, JSON
T13C2.4.NA RNA None 591 None Fasta, JSON
T13C2.4.AA.PD_5-197 Protein Phosphatase Domain None 193 None Fasta, JSON