Gene ctdspl2
ctdspl2
Classification
Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.
Protein domain
Protein domains of ctdspl2.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.
Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.
Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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Phosphatase | ctdspl2.AA | Subfamily.HSPC129.PD | 389-551 | 60 | 1.7e-77 | 248.0 | In-house | 1-164 (164) | Show / Hide |
Range on Protein: 389-551 Range on HMM: 1-164/164 Sequence Identity: 60% (100 aa) PKISLVLDLDETLVHCSTEPLEQPHLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPN-NKIKYRLYRDSCVYVDGN |. |||||||||||||| ..||. |.|.| .....|||. . |||..|||..||..||||.||||..|||.|||...||. .....||.|. || |||| pefslvldldetlvhcslakledatlsfkveyqdktyqvyvrlrpflreflervsklfevilftaskkvyadklldlldpekklvrhrlfrehcvcvdgn YLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPFLESLTNVEDVR |.||||.|||||.. .|.|||||.|..|..|||||||||.||||.|||.|.||||.|.. |||| yikdlsilGrdlsktiivdnspqafayqlenGipieswfadendsellkllpfleklaekedvr |
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Phosphatase | ctdspl2.AA | Subfamily.SCP.PD | 390-551 | 56 | 2.8e-79 | 253.6 | In-house | 2-163 (163) | Show / Hide |
Range on Protein: 390-551 Range on HMM: 2-163/163 Sequence Identity: 56% (92 aa) KISLVLDLDETLVHCSTEPLEQPHLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCVYVDGNYL |..|||||||||||.|..|.|......||....|..||...||||..|||.||...|||..||||.. ||.......|..|.||.||.|.|||...|||. kkclvldldetlvhssfkpvenadfvvpveidgtvhqvyvlkrpfvdeflkkvgelfevvlftaslakyadpvadlldkknvikarlfrescvfhkgnyv KDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPFLESLTNVEDVR |||| ||||||.|||.||||.|. |..||..|.||||.||.|.|||.|.|.||.|..||||. kdlsrlGrdlkkvvivdnspasyifhpdnavpveswfddeedtelldllplleelskvedvl |
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Phosphatase | ctdspl2.AA | NIF | 391-551 | 42 | 6.7e-79 | 273.22 | Pfam | 1-189 (189) | Show / Hide |
Range on Protein: 391-551 Range on HMM: 1-189/189 Sequence Identity: 42% (81 aa) ISLVLDLDETLVHCS--TEPLEQPHLTFPVFFNNTEYQVFAKK-RPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDP--NNKI--KYRL---YRDS . ||||||||||||. .|| ... ..|. ||. .|.. .| ||. .||| ..| ..|..|.|||...||......||| .. . ..|| ||.. KTLVLDLDETLVHCNPWWEPPNWHDFIVPIPFNGQNHQWYVYKPRPYCDEFLQHMSKYYEIVIWTASMKEYADPVIDYIDPKSKKYFDGHHRLICWYREH CV-YVDG-NY-L-KDLSVL--GR-DLKQVVIIDNSPQSFGFQVDNGIPIES-WFE-----D-END--KELLQLVPFL-ESLT-NV-EDVR |. |..| || ||||.| .| ||..|.|.||||.|. .| ||||||.. |.. | ..| .|||.| ||| |.| .. .||| CWLYRNGGNYYVKKDLSILWYNRWDLSRVIIVDNSPHSW-LQPDNGIPIPPYWYGYHDDDDSPDDFWNELLDLLPFLIEYLALQCLDDVR |
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Phosphatase | ctdspl2.AA | CPDc | 389-532 | 36 | 2.5e-66 | 227.59 | SMART | 1-173 (173) | Show / Hide |
Range on Protein: 389-532 Range on HMM: 1-173/173 Sequence Identity: 36% (64 aa) PKISLVLDLDETLVHC--------------STEPLEQPHLTFP----------VFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLN .| .||||||.||||. | .. .. ..| | ......|.. ||||. .||| ..| .|...||.....|| ..|. KKKTLVLDLDHTLVHSCMIPTLHHWMKYLRSFKEWTRRDFIWPQLKWFHMCMIVEIDGHPHQWYVKKRPHVHEFLKRCSKWYEMHVFTMGMRMYADPVLD MIDPNN-KIKYR-LYRDSCVYVDGN-YLKD-LSVLGR-DLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDK |.||.. .. || ||||.|||..|. | || ||...| ||. |.|||.||.|. .. .|.|||..|| . .|. MLDPKRKYFIYRRLYRDHCVYHKGKTYVKDTLSLVNRCDLSMVIIIDDSPDSWPWHPENAIPIKPWFYFMHDT |
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Phosphatase | ctdspl2.AA | Family.FCP.PD | 390-551 | 52 | 5.3e-63 | 201.0 | In-house | 2-164 (164) | Show / Hide |
Range on Protein: 390-551 Range on HMM: 2-164/164 Sequence Identity: 52% (85 aa) KISLVLDLDETLVHCSTEPLEQPHLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDP-NNKIKYRLYRDSCVYVDGNY |. |||||||||||....| ..|.....| ....| .|. ||||...|||.|||...|..|||||.. ||.......|| .. .|.||.||.||.|.||| kklLVlDLdetLvhselkpknkpdfvvkveideleetvyvkkRPhldeFLekvselyeiviftastrkyadpvadiLDpekklfkkrllrdecvlvkgny LKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPFLESLTNVEDVR ||||.|||||..|.|||.||.|. .. ||.|...|..||..|.|||.|.|||||| ..|||| vkdLsklgrdlskviiiDdspdsyklnpdnaikvksfkedpkDteLldLlpfleslakeedvr |
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Phosphatase | ctdspl2.AA | Subfamily.DULLARD.PD | 392-551 | 39 | 8.3e-50 | 157.9 | In-house | 4-172 (172) | Show / Hide |
Range on Protein: 392-551 Range on HMM: 4-172/172 Sequence Identity: 39% (66 aa) SLVLDLDETLVHC--------STEPLEQPHLTFPVFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNN-KIKYRLYRDSCV |||||||||.| .... .|.... | .... ... |||. ..||..|| ....||||| |.||.......| ...| |.||..|. . tlvldldetlihsahdsvtkstvkegtapdfklkvlierepvlfyvykrPhvdlfldvvskWydlviftasmeeyaaavvdkldsgrgilkrryyrqhCt YVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQLVPFLESLTNVEDVR |.| ||||.. ||..|.|.||||... ..||.|||.||. | .|..||.|.|||..| ..||| lesgkytkdlslvsedlssviilDnspvayrknpdnaipikswisdpsdtallnllPfldalrftkdvr |
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Phosphatase | ctdspl2.AA | Group.HAD.PD | 392-548 | 34 | 1.3e-42 | 135.2 | In-house | 3-187 (190) | Show / Hide |
Range on Protein: 392-548 Range on HMM: 3-187/190 Sequence Identity: 34% (63 aa) SLVLDLDETLV-HCSTEPLEQPHLTFPVFFNN----TEYQVFAKKR------------PFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDP-NNKIK .||||||..|. |.| ||||. .| ... |. ... .|| |. .|||..|. ..|...|||... ||. .....|. ....| tlvlDldgvlwlhgspepleglrskgkvlifltnnatksrlyllkrlallgflveevephldeflervgelyelvvftagtreyadpvvgavdvgdeafs YRLYRDSCVYVDGNYLK------DLSVLGRDLKQVVIIDNSPQSFGF--QVDNGIPIESWFEDENDKELLQLVPFLESL--TNVE |..||.|||..|.. . ||..|.|||..||||||.|..|.| . .|...|.....| .|.|||.|.|.||.. ... yrklrdacvylkgpgalllatnrdlgalvrdlekvviidnkpsvfafecnpenalmigdfiddildaellglipdlenidvrfgk |
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Phosphatase | ctdspl2.AA | Subfamily.TIM50.PD | 422-551 | 39 | 1.4e-39 | 124.7 | In-house | 21-150 (150) | Show / Hide |
Range on Protein: 422-551 Range on HMM: 21-150/150 Sequence Identity: 39% (52 aa) NTEYQvfAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKYRLYRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIP .| .. ||||. . ||..... ||...||..| ..| .|.. .||.. |.|||.||.. ||||. .|||| | |||..|...| ..|..| .| . . ktGwr--fkkrPgvdafleelaelfeivvftseqgltaaplidkldPkqlimyrlfrdatkyvdGehvkdlsklnrdlskvivvdldkesvklqpenala IESWFEDENDKELLQLVPFLESLT--NVEDVR . | ...|.|||.|..||. .. .||||| lkkwkGnaddrelldllaflktiatsevedvr |
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Phosphatase | ctdspl2.AA | Subfamily.FCP1.PD | 390-515 | 29 | 2e-21 | 66.1 | In-house | 2-134 (150) | Show / Hide |
Range on Protein: 390-515 Range on HMM: 2-134/150 Sequence Identity: 29% (39 aa) KISLVLDLDETLVHCSTEPL-EQPHLTFP---VF-FNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKIKY-R-LYRDSCV |. ||.|||.||.|....| | .. . | ..... . |.|| .|||.|.|...|. |.| .. ||... ...||..|. || || .. klvLvvDlDqtlihttkdptievkeeklkdikkftlpeekevyyvklRpnlkeFleklsklyelhiytmgtraYaeqiakilDpekklFserilsrdell YVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQ . | ... .. ..|||||. . . |. nassktkklkklfptgdsmvviiDDredvWnfa |
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Phosphatase | ctdspl2.AA | Subfamily.UBLCP1.PD | 424-550 | 25 | 5e-06 | 15.3 | In-house | 20-164 (165) | Show / Hide |
Range on Protein: 424-550 Range on HMM: 20-164/165 Sequence Identity: 25% (35 aa) EYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKL----LNMIDPNNKIKYRLYRDSCVYVDG-NY----LKDLSVLGRDLKQ-----VVIIDNSP ... |||..|||| . . ... |..|.. . . . .|| || . | . .. |. .| | | |. . ||.. .|. . | aedalelkrpyleefltsayedydiviwsatsmkwievklkelGvadnpnykiafvldstamikvttpkygvievkplgviwkklkkfsskntimfddlr QSFGFQVDNGIPIESW----FEDENDKELLQLVPFLESLTNVEDV ||. |. . .. ..|||||.| .| .... ||. rnflmnpknGlkirpfkeadlnrdkdkellkltkylkeiakledf |
Sequence
Name | Sequence Type | Origin | Length | Description | Download |
---|---|---|---|---|---|
ctdspl2.AA | Protein | None | 567 | None | Fasta, JSON |
ctdspl2.NA | RNA | None | 1704 | None | Fasta, JSON |
ctdspl2.AA.PD_389-551 | Protein Phosphatase Domain | None | 163 | None | Fasta, JSON |