• Phosphatome.Net

Gene Nvec_50340

Nvec_50340
Species: N.vectensis
Alias: Nvec_50340
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: Cx5R-I
Family: Myotubularin
Subfamily: MTMR14
Protein domain

Protein domains of Nvec_50340.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase Nvec_50340.AA Family.Myotubularin.PD 294-366 30 6.3e-11 30.5 In-house 31-97 (141) Show / Hide 
Range on Protein: 294-366
Range on HMM: 31-97/141
Sequence Identity: 30% (22 aa)

LNSIMDGEGGTLIHCISGWDRTPLFVSLLRLSLwaDRkVHASLSASEILyltIAYDWFLFGHDLPDRIQKGEE
.... . .  .|.||. |||||.  .|| .| |  |   . ...  |.|   |  .|. ||| . .|. .|..
vekvekektsvlvhcsdGWdrtaqltslaqlll--dp-yyrtieGfevl---iekeWlsfGhkfaerlghgdk
Phosphatase Nvec_50340.AA Subfamily.MTMR3.PD 294-367 34 7.7e-10 27.2 In-house 25-92 (135) Show / Hide 
Range on Protein: 294-367
Range on HMM: 25-92/135
Sequence Identity: 34% (25 aa)

LNSIMDGEGGTLIHCISGWDRTPLFVSLLRLSLwaDrKVHASLSASEILyltIAYDWFLFGHDLPDRIQKGEEV
|..   .   |.||  ||||||  |.| .| |  |   . .|   ..|   .  .|. ||| . ||  .||.. 
vnavdkegrpvlvhcsdgwdrtpqivalaklll--d-pyyrtlegfkvl---verewldfghkfadrcghgeds
Phosphatase Nvec_50340.AA Subfamily.C2-MTMR1.PD 304-377 29 2.6e-08 22.4 In-house 40-107 (137) Show / Hide 
Range on Protein: 304-377
Range on HMM: 40-107/137
Sequence Identity: 29% (22 aa)

TLIHCISGWDRTPLFVSLLRLSLWADRKvhaslsASEILYLTIAYDWFLFGHDLPDRIQKGEEVFHFCFNFLKY
.|.||  |||||  .|.| .| |    .      . . | . |  .|. ||| . .|  . . | .    ||..
alvhcsdgwdrtsqlvllaqllldpyyr------tidglivliekewlafghkfderlggadsvserspiflqf
Phosphatase Nvec_50340.AA Subfamily.MTMR1.PD 300-367 33 3.5e-08 21.6 In-house 45-106 (149) Show / Hide 
Range on Protein: 300-367
Range on HMM: 45-106/149
Sequence Identity: 33% (22 aa)

GEGGTLIHCISGWDRTPLFVSLLRLSLwaDrKVHASLSASEILyltIAYDWFLFGHDLPDRIQKGEEV
.   ..||  |||||. . ||  | |  |   . ..   |.|   |  .|  ||| . .|| .|..  
ektsvvvhcsdgwdrtaqltslamlll--d-syyrtikgfevl---iekewlsfghkfaerighgdkn
Sequence
Name Sequence Type Origin Length Description Download
Nvec_50340.AA Protein None 385 None Fasta, JSON
Nvec_50340.NA RNA None 1155 None Fasta, JSON