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Gene spur_hmm201840,hmm169877

spur_hmm201840,hmm169877
Species: S.purpuratus
Alias: spur_hmm201840,hmm169877
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: LMWPTP_SSU72
Family: Ssu72
Subfamily: Ssu72
Protein domain

Protein domains of spur_hmm201840,hmm169877.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase spur_hmm201840,hmm169877.AA Ssu72 1-191 47 1.4e-120 411.64 Pfam 1-214 (214) Show / Hide 
Range on Protein: 1-191
Range on HMM: 1-214/214
Sequence Identity: 47% (102 aa)

MPLRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTGATVKLPGPAQDKPNIYDFKTTYEEMYQDLKRKDRDL--YTQNGILHMLDRNRRIKSKPERFQN-
..|....||.|||||||||| .|.|.|..|.|||||. |.||||. ||||.||| |.|...|.|| ..|.||  |||||.||||||||||| .|||.|. 
SKLKFCTVCASNQNRSMEAHKVLKKAGYDVRSYGTGSHVRLPGPSIDKPNVYDFGTPYDDIYNDLESQDEDLVNYTQNGLLHMLDRNRRIKWCPERWQDW

-SKDK--FDVVLTAEERVYDQVLEDFESKEEETQIPVHIINIDIQDNHEEATIGAFRMSNLCIKLE----------------ALRDLDKEIDELIQLFEE
  ..   |||| | |||..|.|.||......... |||.||.||.||||||.|||...  || .|.                |  |.. .|.|... ..|
FCTERGKFDVVITCEERCFDAVCEDLMNRGQQLNQPVHVINVDIKDNHEEAIIGAKAICDLCQMLHDFAQKERQGWHQFCDEASEDWEDQIMEILHEWQE

EL-NISVLHTLCFY
.  . ..|...|||
QHPHRPFLYCVCFY
Phosphatase spur_hmm201840,hmm169877.AA Family.Ssu72.PD 2-191 66 5.6e-102 326.9 In-house 2-191 (191) Show / Hide 
Range on Protein: 2-191
Range on HMM: 2-191/191
Sequence Identity: 66% (125 aa)

PLRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTGATVKLPGPAQDKPNIYDFKTTYEEMYQDLKRKDRDLYTQNGILHMLDRNRRIKSKPERFQNSKDK
||||||||||||||.|||..|.||||||||||||..||||||..||||.|.|.||||..|.|||.||..||||||.|.|||||||||..|||||..|.||
klriavvcssnqnrsleahkllkkkGfnvksyGtgsavklPGpsidkPnvyefgttyediykdlkekdkelytqnGllemldrnrrikkaPerfqeekkk

FDVVLTAEERVYDQVLEDFESKEEETQIPVHIINIDIQDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEEELNISVLHTLCFY
|.|||.||||||.|.||.||.||... |||.||.||.||.||||.|||....|. .||. .||..||||... |||. . ..||...|| 
fdivltveervydavvedlesreeksskpvhvinvdikdnaeeatlGaflilelaemleksedledeideileefeektkrellhsvafy
Phosphatase spur_hmm201840,hmm169877.AA Subfamily.Ssu72.PD 2-191 66 5.6e-102 326.9 In-house 2-191 (191) Show / Hide 
Range on Protein: 2-191
Range on HMM: 2-191/191
Sequence Identity: 66% (125 aa)

PLRIAVVCSSNQNRSMEAHAILSKKGFNVKSYGTGATVKLPGPAQDKPNIYDFKTTYEEMYQDLKRKDRDLYTQNGILHMLDRNRRIKSKPERFQNSKDK
||||||||||||||.|||..|.||||||||||||..||||||..||||.|.|.||||..|.|||.||..||||||.|.|||||||||..|||||..|.||
klriavvcssnqnrsleahkllkkkGfnvksyGtgsavklPGpsidkPnvyefgttyediykdlkekdkelytqnGllemldrnrrikkaPerfqeekkk

FDVVLTAEERVYDQVLEDFESKEEETQIPVHIINIDIQDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEEELNISVLHTLCFY
|.|||.||||||.|.||.||.||... |||.||.||.||.||||.|||....|. .||. .||..||||... |||. . ..||...|| 
fdivltveervydavvedlesreeksskpvhvinvdikdnaeeatlGaflilelaemleksedledeideileefeektkrellhsvafy
Phosphatase spur_hmm201840,hmm169877.AA Group.LMWPTP_SSU72.PD 3-191 42 4.3e-59 187.1 In-house 1-161 (163) Show / Hide 
Range on Protein: 3-191
Range on HMM: 1-161/163
Sequence Identity: 42% (78 aa)

LRIAVVCSSNQNRSMEAHAILSKkgfnvksygtgaTVKLPGPAQDKpNIYDFK-TTYEEMYQDLKRKDRDLYTQNGILHMLDrnrrikSKPERFQNSK-D
|....||..|..||.||.|.|.|            .|||||...|| |...|. ||||..|..|||.|..||.|||.|.|||..|..||... .|||..|
lkvlfVClgNicRSpeAeavlkk------------lvklpglssdk-nvdsfgtttYedgysplkradkelykqnGllrmld------hrprqfqeedfe

KFDVVLTAEERVYDQVLEDFESKEEETQipvhiinidiqDNHEEATIGAFRMSNLCIKLEALRDLDKEIDELIQLFEEELNISVLHTLCFY
|..||..|.| ||.||.|....           ||.|||..|||..|.|. ..|. .||....|| .. |||. .  |||. .||      
kFDyiltmdernldevkedlesrekksn-----------dnaeeallGafqisklaeiiedpedleeyydeeleeFeesykqlvlhckaFy
Sequence
Name Sequence Type Origin Length Description Download
spur_hmm201840,hmm169877.AA Protein None 191 None Fasta, JSON
spur_hmm201840,hmm169877.NA RNA None 573 None Fasta, JSON
spur_hmm201840,hmm169877.AA.PD_1-191 Protein Phosphatase Domain None 191 None Fasta, JSON