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Gene Scaffold27890

Scaffold27890
Species: S.purpuratus
Alias: Scaffold27890
External Links:
Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Superfamily: PPP
Family: PPP
Subfamily: PPP6C
Protein domain

Protein domains of Scaffold27890.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit phosphatase group/family/subfamily, which is helpful to understand the relationship between phosphatases. Transmembrane region is predicted by TMHMM 2.0. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking. View complete domain list.

Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Phosphatase Scaffold27890.AA Subfamily.PPP4C.PD 1-53 73 1.1e-26 83.7 In-house 58-110 (271) Show / Hide 
Range on Protein: 1-53
Range on HMM: 58-110/271
Sequence Identity: 73% (39 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. |||||||.||.|||  ||.||...||||.|.|||||||||||||||| |
ylflgdfvdrgfysvetfllllalkvrypdritlirgnhesrqitqvygfyde
Phosphatase Scaffold27890.AA Subfamily.PPP6C.PD 2-53 88 2.7e-31 98.6 In-house 59-110 (271) Show / Hide 
Range on Protein: 2-53
Range on HMM: 59-110/271
Sequence Identity: 88% (46 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.. |||||||||||||||||||||||.||||.|||||||||||||||||| |
vflgdfvdrgyysletftrlltlkakypdritllrgnhesrqitqvygfyde
Phosphatase Scaffold27890.AA Subfamily.PPP2C.PD 1-53 67 1e-25 80.4 In-house 58-110 (271) Show / Hide 
Range on Protein: 1-53
Range on HMM: 58-110/271
Sequence Identity: 67% (36 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||.|||||||.|| | |..|| ....|| .||||||||||||||||| |
ylfmgdyvdrgyysvetvtllvalkvrykeritilrgnhesrqitqvygfyde
Phosphatase Scaffold27890.AA Family.PPP.PD 2-53 55 5.5e-25 78.2 In-house 127-178 (349) Show / Hide 
Range on Protein: 2-53
Range on HMM: 127-178/349
Sequence Identity: 55% (29 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
|  ||.||||..|.|... |..||...|.|..|||||||||....|||||.|
lFlGDyVDRGkfsvEvilllfalkllypsrffllRGnhEsrsvnkvygfyee
Phosphatase Scaffold27890.AA Group.PPP.PD 2-53 55 5.5e-25 78.2 In-house 127-178 (349) Show / Hide 
Range on Protein: 2-53
Range on HMM: 127-178/349
Sequence Identity: 55% (29 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
|  ||.||||..|.|... |..||...|.|..|||||||||....|||||.|
lFlGDyVDRGkfsvEvilllfalkllypsrffllRGnhEsrsvnkvygfyee
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_3.PD 1-53 52 9e-21 64.2 In-house 95-147 (308) Show / Hide 
Range on Protein: 1-53
Range on HMM: 95-147/308
Sequence Identity: 52% (28 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||.|||| .|.|  . |..|| ..||...||||||||| . . |||| |
ylflGdyvdrGpfsievvillfalkllypdkvfllrGnhesrpvntqyGfyre
Phosphatase Scaffold27890.AA Subfamily.PPP1C.PD 1-53 54 1.6e-20 63.6 In-house 58-110 (271) Show / Hide 
Range on Protein: 1-53
Range on HMM: 58-110/271
Sequence Identity: 54% (29 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||.||||  |||| . ||..| |.|... |||||||. .|...|||| |
ylflGdyvdrGkqsletivlllaykikypenffllrGnhecasinriygfyde
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_6.PD 1-53 56 3.4e-19 58.9 In-house 58-110 (272) Show / Hide 
Range on Protein: 1-53
Range on HMM: 58-110/272
Sequence Identity: 56% (30 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||.|||| .|||. . ||. |.|||....|||||||  .| .||||| |
ylflGdyvdrGrqslevillllaykvkfpnnffllrGnheceainrvyGfyde
Phosphatase Scaffold27890.AA Subfamily.PPP3C.PD 1-51 50 9.7e-18 54.3 In-house 58-108 (292) Show / Hide 
Range on Protein: 1-51
Range on HMM: 58-108/292
Sequence Identity: 50% (25 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFY
.|. ||.|||||.|.|.   |..|| ..|.|. |||||||.|..|. . | 
ylflGdyvdrGyfsiecvlylyalkiaypsrlfllrGnhecrhlteyftfk
Phosphatase Scaffold27890.AA Subfamily.PPP5C.PD 1-53 49 1.1e-17 53.8 In-house 132-184 (346) Show / Hide 
Range on Protein: 1-53
Range on HMM: 132-184/346
Sequence Identity: 49% (26 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||||||| .|.|.   ||..|  .|... | |||||| .. ..||| ||
ylfngDfvdrGsfsveviltllgfkllypnhfflsrGnhesdnmnklyGfege
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_4.PD 2-53 50 1.2e-17 54.0 In-house 59-110 (271) Show / Hide 
Range on Protein: 2-53
Range on HMM: 59-110/271
Sequence Identity: 50% (26 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.. ||.||||  ..|..  |..|| ...|||||||||||  .. ..|||| |
vflgdyvdrgpqgievlillfclkiryrdrivllrgnheiasvnkkygfyee
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_5.PD 1-53 49 1e-16 50.6 In-house 58-110 (274) Show / Hide 
Range on Protein: 1-53
Range on HMM: 58-110/274
Sequence Identity: 49% (26 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
.|. ||.||||  |||    |..|| ..| .. ||||||| ..| ..|||. |
ylflGdyvdrGakslevslllfslkiaypkkvhllrgnhevkkinklygfkee
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_2.PD 2-53 50 4.8e-16 48.4 In-house 62-113 (281) Show / Hide 
Range on Protein: 2-53
Range on HMM: 62-113/281
Sequence Identity: 50% (26 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
|. ||.||||  |.|.   ||..| ..|| . |||||||  . |  |||. |
lflgdyvdrgrqsvevvllllaykhlypdhlfllrgnhedvnttltygffde
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_7.PD 1-51 44 2e-14 43.2 In-house 69-119 (296) Show / Hide 
Range on Protein: 1-51
Range on HMM: 69-119/296
Sequence Identity: 44% (22 aa)

FLLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFY
|.  ||.||||..|.|  . ...||  .| ...|||||||.. |   |.| 
fvfLGdYvdrGsksieCisLvfalkilyptkyillrGnhetkainfayefr
Phosphatase Scaffold27890.AA Subfamily.PPP7C.PD 2-52 42 4.8e-12 35.1 In-house 100-150 (338) Show / Hide 
Range on Protein: 2-52
Range on HMM: 100-150/338
Sequence Identity: 42% (21 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYG
.. |||||||  |.|    |..|   .|  . | |||||   .   |||  
vfnGdfvdrGkesveillilfalllvypkevylnrGnhedyilnlryGfik
Phosphatase Scaffold27890.AA Metallophos 5-53 40 5.9e-12 45.98 Pfam 33-80 (124) Show / Hide 
Range on Protein: 5-53
Range on HMM: 33-80/124
Sequence Identity: 40% (20 aa)

GDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQVYGFYGE
||.||||..|.|.. .|. .| ..|......||||........|||| |
GDYVDRGPWSDECIWLLFCYKMNYPGPVYWVRGNHDYMHGNDFYGFY-E
Phosphatase Scaffold27890.AA Subfamily.PPP_Nematode_1.PD 2-47 37 8.8e-08 21.7 In-house 59-104 (273) Show / Hide 
Range on Protein: 2-47
Range on HMM: 59-104/273
Sequence Identity: 37% (16 aa)

LLQGDFVDRGYYSLETFTRLLTLKAKFPDRIVLLRGNHESRQITQV
|. |...| | .|||.   ||  |  .| ..|.|||..|   .   
lflGnlldsGkssleellillcskkcyPknvvilrGeyetelvksd
Sequence
Name Sequence Type Origin Length Description Download
Scaffold27890.AA Protein None 53 None Fasta, JSON
Scaffold27890.NA RNA None 159 None Fasta, JSON
Scaffold27890.AA.PD_5-53 Protein Phosphatase Domain None 49 None Fasta, JSON