Phosphatase GeneID SpurP196

SpurP196 is a fragment of true gene or redundant to SpurP195?

1. BLAT the protein sequences of SpurP195 and SpurP196 in UCSC Genome Browser. The results showed SpurP195 is encoded by Scaffold54273 and SpurP196 by Scaffold36548.

browser details SpurP195 1888 1 636 636 99.9% Scaffold54273 ++ 276136 292169 16034

browser details SpurP195 162 455 508 636 100.0% Scaffold36548 +- 361 522 162

browser details SpurP195 135 410 454 636 100.0% Scaffold82761 +- 679 813 135

browser details SpurP196 165 1 55 55 100.0% Scaffold36548 +- 361 525 165

browser details SpurP196 165 1 55 55 100.0% Scaffold54273 ++ 290574 290738 165

2. We then retrieved the genomic sequence encoding SpurP196 and BLATed it. The results showed the regions encoding SpurP195 and SpurP196 are different.

browser details strPur2_dna 165 1 165 165 100.0% Scaffold36548 + 361 525 165

browser details strPur2_dna 157 1 165 165 97.6% Scaffold54273 - 290574 290738 165