Difference between revisions of "Phosphatase GeneID MbreP049"

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Both the gene models are present in the data of JGI Monosiga genome project.
 
Both the gene models are present in the data of JGI Monosiga genome project.
  
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match  mis-]    rep.    N's    Q gap  Q gap  T gap  T gap  strand  Q              Q      Q      Q      T              T      T      T        block  blockSizes      qStarts  tStarts
 
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        match  match          count  bases  count  bases          name            size    start  end    name            size    start  end      count
 
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7041    0      0      0      1      1      2      283    +-      MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679  7042    0      7042    scaffold_2      3607471 2797910 2819316 3      71,2241,4729,  0,71,2313,      788155,788547,795374,
 
7041    0      0      0      1      1      2      283    +-      MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679  7042    0      7042    scaffold_2      3607471 2797910 2819316 3      71,2241,4729,  0,71,2313,      788155,788547,795374,
  
 
1726    0      0      0      0      0      0      0      +-      MbreP049_jgi|Monbr1|2269|gw1.2.563.1    1726    0      1726    scaffold_2      3607471 2797910 2803088 1      1726,  0,      804383,
 
1726    0      0      0      0      0      0      0      +-      MbreP049_jgi|Monbr1|2269|gw1.2.563.1    1726    0      1726    scaffold_2      3607471 2797910 2803088 1      1726,  0,      804383,

Latest revision as of 18:55, 30 September 2015

Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project (PSL format).

Both the gene models are present in the data of JGI Monosiga genome project.


7041 0 0 0 1 1 2 283 +- MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679 7042 0 7042 scaffold_2 3607471 2797910 2819316 3 71,2241,4729, 0,71,2313, 788155,788547,795374,

1726 0 0 0 0 0 0 0 +- MbreP049_jgi|Monbr1|2269|gw1.2.563.1 1726 0 1726 scaffold_2 3607471 2797910 2803088 1 1726, 0, 804383,

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