Difference between revisions of "Phosphatase Subfamily PPM1E"

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[[Phosphatase classification|Phosphatase Classification]]: [[Phosphatase_Superfamily_PPM|Superfamily PPM (PP2C)]]: [[Phosphatase_Family_PPM|Family PPM (PP2C)]]: [[Phosphatase_Subfamily_PPM1E|Subfamily PPM1E]] (POXP, FEM-2)
 
[[Phosphatase classification|Phosphatase Classification]]: [[Phosphatase_Superfamily_PPM|Superfamily PPM (PP2C)]]: [[Phosphatase_Family_PPM|Family PPM (PP2C)]]: [[Phosphatase_Subfamily_PPM1E|Subfamily PPM1E]] (POXP, FEM-2)
 
The subfamily is named named after two human PPMs, [[Phosphatase_Gene_PPM1E|PPM1E]] (also known as [http://www.ncbi.nlm.nih.gov/gene/22843 POXP1, PP2CH, caMKN, CaMKP-N]) and [[Phosphatase_Gene_PPM1F|PPM1F]] (also known as [http://www.ncbi.nlm.nih.gov/gene/9647 POXP2, CAMKP, FEM-2, hFEM-2, CaMKPase]). The subfamily has a single copy in most non-vertebrates from Monosiga to ciona, and duplicated when vertebrates emerged. Both PPM1E and PPM1F dephosphorylate kinases CaMK2g <cite>Takeuchi01 Takeuchi04 Ishida05</cite> and PAK <cite>Koh02</cite>, and PPM1E can also dephosphorylate CaMK4 (of different families from CaMK2g).
 
 
The subfamily has some potent inhibitors <cite>Ishida07</cite>.
 
 
The subfamily also dephosphorylate 5'-AMP-activated protein kinase (AMPK) <cite>Voss12</cite>. The activation of AMPK is related to the treatment of type 2 diabetes.
 
  
 
=== Evolution ===
 
=== Evolution ===

Revision as of 16:46, 10 June 2015

Phosphatase Classification: Superfamily PPM (PP2C): Family PPM (PP2C): Subfamily PPM1E (POXP, FEM-2)

Evolution

CAMK2

Domain

Functions

Human PPM1E and PPM1F

Human has two members: PPM1E (POPX1, PP2CH, caMKN, CaMKP-N) and PPM1F (POPX2, CAMKP, CaMKPase, FEM-2, hFEM-2).

Human PPM1EHuman PPM1F is widely expressed in different tissues, as shown by Western blotting analysis [1, 2].

PPM1E and PPM1F have different sub-cellular localizations. Human PPM1E is localized to nculear [3]; PPM1F is localized to cytosol [1, 2]. Human PPM1E has two C-terminal nuclear localization signals (NLSs), at 668-702 and 706-742, respectively [4]. The two NLSs can not be computational identified by NLS prediction tools NLS mapper and NLStradamus.

Both PPM1E and PPM1F dephosphorylate and deactivates kinases of CAMK (Ca2+/calmodulin-dependent protein kinase) group as evidenced by extensive studies. CAMK2 is regulated by autophosphorylation at multiple sites, including Thr-286 activates CAMK2. PPM1F dephosphorylate Thr-286 on CAMK2 in fibroblasts [5]. Human PPM1E dephosphorylates CAMK4 and nuclear CAMK2, while PPM1F dephosphorylates CAMK1 and cytosolic CAMK2 [2, 3]. Rat PPM1F extracted from brain also dephosphorylates CAMK2, but not phosphorylase kinase, histones, MBP, α-casein, andd phosphorylase α [6]. In addition, human PPM1F regulates the phosphorylation level of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) in by dephosphorylating and deactivating CAMKs that are responsible for the phosphorylation of GAPDH.

Both PPM1E and PPM1F can dephosphorylate and inactivate p21 (Cdc42/Rac)-activated kinase (PAK), which is potently activated by autophosphorylation at multiple sites [7]. PPM1E can bind to PAK interacting guanine nucleotide exchange factor PIX [7]. The association between PPM1E/PPM1F with PAX complex may allow PAK to cycle rapidly between active and inactive states [7].

Other substrates and interacting partners:

  • Human PPM1F dephoshorylates serine-690 of KIF3A, which is phosphorylated by CAMK2. KIF3A is a motor subunit which forms a heterotrimeric complex with KIF3B, another motor subunit, and KAP3, the non-motor subunit [8].
  • Human PPM1E dephosphorylates 5'-AMP-activated protein kinase (AMPK) [9].
  • Human PPM1F can dephosphorylate C. elegans fem-3 [2], but fem-3 is only found in Caenorhabditis according to OrthoDB.
  • By proteomic approach, it was found that human PPM1F regulates the activity of glycogen synthase kinase-3 (GSK3) [10] and MAPK1/3 [11], therefore regulating cancer cell motility [12]. GSK3 is not the subtratre of PPM1F, and it is unclear whether PPM1F directly dephosphorylate MAPK1/3.
  • Human PPM1F interacts with the formin protein mDia1 (DIAPH1) and decreases the ability of mDia1 to activate the transcription of serum response element (SRE) [13].

PPM1E is proposed to be regulated by oxidation/reduction at Cys-359 [14].

C. elegans fem-2

Fem-2 is C. elegans PPM1E, which, together with fem-1 and fem-3, is required by male sexual development in C. elegans [15]. Crystal structure of C. elegans Fem-2 shows two structural domains: N-terminal domain from 13-160 and C-terminal phosphatase domain from 161-436 [16]. Fem-2 associates with fem-1 and fem-3 via its N-terminal domain [16]. However, the N-terminal domain is only found in several nematodes, by BLASTing the region against NR database. Meanwhile, fem-3 is only present in Caenorhabditis by BLASTing the protein sequence of longest isoform against NR database; Fem-1 is found throughout metazoa (see internal data).

Fem-2 exhibits magnesium-dependent casein phosphatase activity in vitro [15].

References

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  1. Error fetching PMID 10348902: [Kitani99]
  2. Error fetching PMID 11559703: [Tan01]
  3. Error fetching PMID 11726284: [Takeuchi01]
  4. Error fetching PMID 15496589: [Takeuchi04]
  5. Error fetching PMID 15140879: [Harvey04]
  6. Error fetching PMID 9442023: [Ishida98]
  7. Error fetching PMID 11864573: [Koh02]
  8. Error fetching PMID 24338362: [Phang14]
  9. Error fetching PMID 20801214: [Voss12]
  10. Error fetching PMID 21656682: [Singh11]
  11. Error fetching PMID 23621870: [Zhang13]
  12. Error fetching PMID 20016286: [Susila10]
  13. Error fetching PMID 18230650: [Xie08]
  14. Error fetching PMID 22743349: [Baba12]
  15. Error fetching PMID 8824590: [Chin-Sang96]
  16. Error fetching PMID 23760267: [Zhang13b]
  17. Error fetching PMID 15680915: [Ishida05]
  18. Error fetching PMID 17897624: [Ishida07]
All Medline abstracts: PubMed | HubMed