Difference between revisions of "Phosphatase Sequence SpurP066 AA"
From PhosphataseWiki
(Created page with "=== Version 2.0 === The original gene model probably consists of two genes: non-lysosomal glucosylceramidase at N-terminal and PTPN9 at C-terminal, as shown by BLASTing the se...") |
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Latest revision as of 15:05, 26 June 2015
Version 2.0
The original gene model probably consists of two genes: non-lysosomal glucosylceramidase at N-terminal and PTPN9 at C-terminal, as shown by BLASTing the sequence of original gene model against eukaryotes NR dataset. We built a gene model only contains the PTPN9 to replace previous version 1.0, using GeneWise. The Entrez gene model XP_011670231.1 and human PTPN9 were used as template proteins.
MTGSSFTNFDLTMSKKLLGMLRDGYPARLKRIYVVTPPLWFKAMYKILTPMLKEKMKERVTLVSAERLCRYLPATSLPKDLGGTAEINHLDWLNSCLDQNSDKNRNSRDLSDALVDTPEALEANQKAVELYAPERIDRIPDLGSPSGGFKVDISLRGSTESLESSHSGTQSDPIRGSIEDMKTNGSSSDSANGTGNGQHITDSLGNGSLKDHRFRDMDDEEKILKDAKEKYETEIVEKDADGDGIPEGPPPKPPRPRPNDSPPPVPDRRDLPDFSATESVHQSTDSGMDIEALVSYVLNMRQSGIYKEYAAIRAEPPAGTFYASKHRLNVHKNRYADVLCYDHSRVFLPILNGDPYSDYLNANYMDGYKQKNAFIATQGALPKTFSDFWLMIWESQCRTIVMTTRTVERGRLKCGQYWPLEEGTSGEYGKISVANLEIETRRDYTITVLTVHNSTTNESRRITHFQFTSWPDFGTPRSALAMLEFREEVRQYQSTSVKEMGDEWTGHPGGPPIVVHCSAGIGRTGTFCTLDISLARLEDVATIDVCNTVRLMRAQRAYSIQTPDQYEFCYFALVEYAQRSDKLPSSIDFSGYEDSESDSDD
Version 1.0
The original gene model from SpBase has the sequence:
MAAAIDDVTVDKDCSENDEDQIEDQIEEQIEDQVEEKSEGNKNQGSELNGIECEVDHLNIASNNSAHGDSLNSRNAGKNDNLAQFGIPQYCWTVQLNHKFSEKWRPLTMVRPHQIKSFVLPSVRYAQMHLKMWRGGKRPFIDVLHPMKFKPVYGVPVGGIGCGAIDRGWKGDFCRWSLSPGRYTYDNVELNQFTVCVRRGGKTVYQQVLSPNKPHNKDLAQAWEWQFPGNRASYHGLYPRAWTKYLLPGQNITLVCRQISPVFPHNYQETSLPVGVFVWDVYNHGTAAADVSIMFTWKNGTGTSADKKGGRWNTGFSSASTSGVMFHDGHPTQPCTMCIAAADGDDVTVTTCASFNPSSQLKELWNDLKEDGQLNTTKGPTERTEKGETLAGAVVSSRHIEPNQQGLLEFALSWDMPKVQFDSCSYFRRYTRWFGRDGDSALALCSHALEEYGDWEKNINEWQNPILENDRLPAWYKSALFNELYFMTDGGGIWVDVDDEYPNGENNAHTRASSLVREYGRFGYLEGHEYRMYNTYDVHFYASFALIMLWPKLELSMQYDFGEYVDHKDEDSFQDLSSGLRSIRRVLDVYLMTQETRELRVREGLLNFNPTEEPVSRELLSEKFTVLPFRDAGGAAIALFSARYHAPHSTPTQAVLQAAVFQLDQALSSYETQRNGLTWIYNMTGSSFTNFDLTMSKKLLGMLRDGYPARLKRIYVVTPPLWFKAMYKILTPMLKEKMKERVTLVSAERLCRYLPATSLPKDLGGTAEINHLDWLNSCLDQNSDKNRNSRDLSDALVDTPEALEANQKAVELYAPERIDRIPDLGSPSGGFKVDISLRGSTESLESSHSGTQSDPIRGSIEDMKTNGSSSDSANGTGNGQHITDSLGNGSLKDHRFRDMDDEEKILKDAKEKYETEIVEKDADGDGIPEGPPPKPPRPRPNDSPPPVPDRRDLPDFSATESVHQSTDSGMDIEALVSYVLNMRQSGIYKEYAAIRAEPPAGTFYASKHRLNVHKNRYADVLCYDHSRVFLPILNGDPYSDYLNANYMDGYKQKNAFIATQGALPKTFSDFWLMIWESQCRTIVMTTRTVERGRLKCGQYWPLEEGTSGEYGKISVANLEIETRRDYTITVLTVHNSTTNESRRITHFQFTSWPDFGTPRSALAMLEFREEVRQYQSTSVKEMGDEWTGHPGGPPIVVHCSAGIGRTGTFCTLDISLARLEDVATIDVCNTVRLMRAQRAYSIQTPDQYEFCYFALVEYAQRSDKLPSSIDFSGYEDSESDSDD
