Difference between revisions of "Phosphatase GeneID AqueP098"
(Created page with " ==== AqueP098 is not identical to AqueP099 ==== The protein sequences are identical. BLAST against sponge proteins in [http://metazoa.ensembl.org/Amphimedon_queenslandica/Too...") |
(→AqueP098 is not identical to AqueP099) |
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But genomic sequence are not identical. BLASTN Contig6625 against sponge genome. They are not identical. | But genomic sequence are not identical. BLASTN Contig6625 against sponge genome. They are not identical. | ||
| + | |||
| + | >Contig6625 dna:scaffold scaffold:Aqu1:Contig6625:1:1910:1 | ||
| + | GCCCGATCACGGAGTACCACAATTTGCCACTTCGCTCATTAGCTTCATCAAGCGAGTACA | ||
| + | AAAAGATCACAACAAAGATAAAGGCGTGCCACTCATGGTCCACTGCAGTGCTGGTGTGGG | ||
| + | TCGTACTGGCACCTTTATCATGCTGGATATAATGATGGACAGATTGAAACAAGAGGAGTC | ||
| + | CATTAATGTGTATGAGGTACTGAGGCAGTTGAGATCAAAGAGAATGTACATGGTTCAAAC | ||
| + | ACAGGTTAGTGTATATAAGAAATACATGTACATTTATCATTTACATGTACATGCATCTTC | ||
| + | ACTTGTATGTGTGTTAACGATAAAACAAAACTATACCACTTTTTGTTTAGTTATACTAAT | ||
| + | ACATGTACGTGTGCCATTTACATGTATATATAGTTCATGTTTTTACTAGTCAATGCTTAT | ||
| + | AAATCCTTTTCGATTTGTGAAAACATTGTAACCCACTTGCTAATTTCAAATTTTTAAGTT | ||
| + | ATGAACATTTAATTGACTTTTGATTACCTGTGTGTACTCTTCTGTCAAAAATTCTTACAA | ||
| + | AAGAATTTAAAATTTTATGTATGTACATGTATCTTGCATATATTTATATATAATAATTAA | ||
| + | TCTTTTTTATTTTATTATTCATAGGCCCAGTATGTGTTCCTTCATGATGCTTTGGATGAG | ||
| + | TTGACCACTTGTGGTGATACTTCGATAATTGGATCCAACCTGAGAGCTCGTGTCAACAAA | ||
| + | ATGCACAAGATGATTCCAGGAAAGAACATAACTGGATTCCAGGAGCAATATGAGGTATAT | ||
| + | ACATGTAGGGATTAGGGAATCAGTAACTGTATAGCTGGATACTATTAGGTTATACTGTAT | ||
| + | AGTCATTTAATTTGACAGAGACAGCTGGGGATTTTTGGATTACATTTTCAATATTAAATC | ||
| + | ATTGAAGTGCATGTGTACAGAAATTAGTGGGTTTTATAGAAATATGGCACCGCCAAATTA | ||
| + | AAGTACCATGTTTTTCCTTGTTTTGGGATGTATGTAGTACTAATTTAGAAACCACAAGCT | ||
| + | TGCAGGGTTTCCCACAAAGCAAACTTCAGCACTATAGTATGTGTACATTGTGGCATTTGG | ||
| + | AGCAAAGTATTTTTTAAAATTCATTTAAAAAATCCAATTTTGATCGAAATCAACTCAAAC | ||
| + | TTGCTACACAACATAAAAACATGTATATGTATTAGAAAAAATTATAAAAATGGAGAATTC | ||
| + | TTTCCTAGTCATTTTTGGCGAAATTTGGCCAAAGACCCTGTACTATAGTACAGGGTCTTT | ||
| + | GGCCCGATTTCAGAGCAACTTTAAAAATTCGTAAAAAATCTAATTTTGATTTTAATTATC | ||
| + | TCAAACTTTCTACGCAACATAAGAACATGTAAATGCATCAGAAAAAATTATAAAAATGAA | ||
| + | AAATTTTCTCCTAGTCATTTTTGGCAAAATGCCTGTACTATAGTACAGGGTTTTTGGCCC | ||
| + | AATTTAGTTGTACACATAAATATCATTGCATGACCATTTGCTGCATAATATAAGATTTTA | ||
| + | CATAAGACTTTTAAGTCACACGATAATTTGTATTATAATATTTTGTCCCCTTGTAGTTAT | ||
| + | TGGATCAGGTTGGATACAAACCCAGTGAAATGATGTACTCTGATGGTACTACTACTGTTA | ||
| + | ATGTACCCAAGAACAGATACCCTGAAATTGTACCATGTAAGTACATACATGTAATACCAG | ||
| + | AATAATACATATGTATTGGTCGTGATAATTTTATGTGTATTTCAATTACTTTTTCCTATT | ||
| + | ATTTATTTTATTTTGTTTGTTCTTTAGTGAATATGCATAGGCCAAGGCTTAGGCCTGATG | ||
| + | GTAGCAATGGATCTGATTATATTAACGCAAGCTTTGTTGACGTAAGTACGGGAATTTTGT | ||
| + | ATTGATTAGGTGTTTATCTAAATCTCTTTTTCCTGCCATTATATCTGTCT | ||
Revision as of 19:00, 28 September 2015
AqueP098 is not identical to AqueP099
The protein sequences are identical. BLAST against sponge proteins in ensemblgenomes.org. Find two hits, the second one is AqueP099.
Subject name Subject description Gene hit Genomic Location Orientation Length Score E-val %ID
PAC:15701411 Aqu1.202883 Contig6625:2-1862 [Sequence] Forward 196 [Sequence] 1025 1.0E-134 100.0 [Alignment ] PAC:15710924 Aqu1.212396 Contig12991:41253-43106 [Sequence] Reverse 189 [Sequence] 991 5.3E-130 100.0 [Alignment]
But genomic sequence are not identical. BLASTN Contig6625 against sponge genome. They are not identical.
>Contig6625 dna:scaffold scaffold:Aqu1:Contig6625:1:1910:1 GCCCGATCACGGAGTACCACAATTTGCCACTTCGCTCATTAGCTTCATCAAGCGAGTACA AAAAGATCACAACAAAGATAAAGGCGTGCCACTCATGGTCCACTGCAGTGCTGGTGTGGG TCGTACTGGCACCTTTATCATGCTGGATATAATGATGGACAGATTGAAACAAGAGGAGTC CATTAATGTGTATGAGGTACTGAGGCAGTTGAGATCAAAGAGAATGTACATGGTTCAAAC ACAGGTTAGTGTATATAAGAAATACATGTACATTTATCATTTACATGTACATGCATCTTC ACTTGTATGTGTGTTAACGATAAAACAAAACTATACCACTTTTTGTTTAGTTATACTAAT ACATGTACGTGTGCCATTTACATGTATATATAGTTCATGTTTTTACTAGTCAATGCTTAT AAATCCTTTTCGATTTGTGAAAACATTGTAACCCACTTGCTAATTTCAAATTTTTAAGTT ATGAACATTTAATTGACTTTTGATTACCTGTGTGTACTCTTCTGTCAAAAATTCTTACAA AAGAATTTAAAATTTTATGTATGTACATGTATCTTGCATATATTTATATATAATAATTAA TCTTTTTTATTTTATTATTCATAGGCCCAGTATGTGTTCCTTCATGATGCTTTGGATGAG TTGACCACTTGTGGTGATACTTCGATAATTGGATCCAACCTGAGAGCTCGTGTCAACAAA ATGCACAAGATGATTCCAGGAAAGAACATAACTGGATTCCAGGAGCAATATGAGGTATAT ACATGTAGGGATTAGGGAATCAGTAACTGTATAGCTGGATACTATTAGGTTATACTGTAT AGTCATTTAATTTGACAGAGACAGCTGGGGATTTTTGGATTACATTTTCAATATTAAATC ATTGAAGTGCATGTGTACAGAAATTAGTGGGTTTTATAGAAATATGGCACCGCCAAATTA AAGTACCATGTTTTTCCTTGTTTTGGGATGTATGTAGTACTAATTTAGAAACCACAAGCT TGCAGGGTTTCCCACAAAGCAAACTTCAGCACTATAGTATGTGTACATTGTGGCATTTGG AGCAAAGTATTTTTTAAAATTCATTTAAAAAATCCAATTTTGATCGAAATCAACTCAAAC TTGCTACACAACATAAAAACATGTATATGTATTAGAAAAAATTATAAAAATGGAGAATTC TTTCCTAGTCATTTTTGGCGAAATTTGGCCAAAGACCCTGTACTATAGTACAGGGTCTTT GGCCCGATTTCAGAGCAACTTTAAAAATTCGTAAAAAATCTAATTTTGATTTTAATTATC TCAAACTTTCTACGCAACATAAGAACATGTAAATGCATCAGAAAAAATTATAAAAATGAA AAATTTTCTCCTAGTCATTTTTGGCAAAATGCCTGTACTATAGTACAGGGTTTTTGGCCC AATTTAGTTGTACACATAAATATCATTGCATGACCATTTGCTGCATAATATAAGATTTTA CATAAGACTTTTAAGTCACACGATAATTTGTATTATAATATTTTGTCCCCTTGTAGTTAT TGGATCAGGTTGGATACAAACCCAGTGAAATGATGTACTCTGATGGTACTACTACTGTTA ATGTACCCAAGAACAGATACCCTGAAATTGTACCATGTAAGTACATACATGTAATACCAG AATAATACATATGTATTGGTCGTGATAATTTTATGTGTATTTCAATTACTTTTTCCTATT ATTTATTTTATTTTGTTTGTTCTTTAGTGAATATGCATAGGCCAAGGCTTAGGCCTGATG GTAGCAATGGATCTGATTATATTAACGCAAGCTTTGTTGACGTAAGTACGGGAATTTTGT ATTGATTAGGTGTTTATCTAAATCTCTTTTTCCTGCCATTATATCTGTCT
