Difference between revisions of "Phosphatase GeneID NvecP079"
(Created page with " NvecP079 is mapped to: EDO46961 NEMVEDRAFT_v1g88020 NEMVEscaffold_17:837330-838001 [Sequence] NvecP080 is mapped to: EDO27247 NEMVEDRAFT_v1g224273 NEMVEscaffold_4309:198-...") |
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EDO27247 NEMVEDRAFT_v1g224273 NEMVEscaffold_4309:198-840 [Sequence] | EDO27247 NEMVEDRAFT_v1g224273 NEMVEscaffold_4309:198-840 [Sequence] | ||
| − | NEMVEscaffold_4309 is shorter and Ns cover the region from 1092-4745. BLAST the region against genomic sequence and the sequence identity with scaffold_17 is ~98%. Thus, we keep both NvecP079 and NvecP080. | + | NEMVEscaffold_4309 is shorter and Ns cover the region from 1092-4745. BLAST the region against genomic sequence and the sequence identity with scaffold_17 is ~98%. Thus, the two scaffolds are not identical and we keep both NvecP079 and NvecP080. |
>NEMVEscaffold_4309 dna:supercontig supercontig:GCA_000209225.1:NEMVEscaffold_4309:1:1091:1 | >NEMVEscaffold_4309 dna:supercontig supercontig:GCA_000209225.1:NEMVEscaffold_4309:1:1091:1 | ||
Latest revision as of 22:28, 28 September 2015
NvecP079 is mapped to: EDO46961 NEMVEDRAFT_v1g88020 NEMVEscaffold_17:837330-838001 [Sequence]
NvecP080 is mapped to: EDO27247 NEMVEDRAFT_v1g224273 NEMVEscaffold_4309:198-840 [Sequence]
NEMVEscaffold_4309 is shorter and Ns cover the region from 1092-4745. BLAST the region against genomic sequence and the sequence identity with scaffold_17 is ~98%. Thus, the two scaffolds are not identical and we keep both NvecP079 and NvecP080.
>NEMVEscaffold_4309 dna:supercontig supercontig:GCA_000209225.1:NEMVEscaffold_4309:1:1091:1 TCCTCTTGCAGAATGAGCTGATTGATTTCAAGTATGTCAAAGAGAGATCATAAATGAACA TGATGCGATTCATAATAGTCGACTTAAGTCCTCTTAAACCTGAAAGACTCCCGCCCTGGA GGCACAAAGAAAAGGGTTCACTCTTATTTTAACCATAATCTTTTTAACTCAATAAAAACT TATATCATCTTTTACAGGAGGGGGCTTCTCAGCCGCGTGAAGTCAAACACTTCCAGTTCA CAGGCTGGCCGGATCACGGTGTTCCTGCACATCCGACGCCATTCCTAGCTTTCCTAAGAC GAGTAAAGTTTTATAACCCTCCCGATGCCGGACCAATTGTCGTTCACTGCAGGTAGGACT CATTCTGTGTACTTGGTTCTTCCTGTTCCGTGTACTGATTGTCTCTTTTTGTGTTGTGCT GTGTACTGATTGGCTCCTTCCGTTTGGTGCTGTGCACTGATTGGCTCCTTCGGTTTTGTG CTGCGTTCTGATTAGTTCCTTCGGTTTTCATGTTTTCTGTGCAGTGCTGGTGTGGGTCGC ACCGGATGTTTCATCGTCATAGACTCCATGCTTGAGCGGCTCAGGCACGAGGAGACTGTT GACATATACGGTCACGTGACGGTACTCAGGACACAGCGGAACTACATGGTTCAGACCCAG GAACAGTACATCTTCTCCCATGATGCCATCTTGGAGGCTGTGTCATGCGGAAACACGGAG GTCCACGCGCGCAACCTTCTCCATCATATCAAAAAGCTGACCGAGCTGGGCAAGGGCGAG GTCACGGGCCTCGAAGAAGAATTTAAGGTTGGTTTAAATAGCTTCTTCATAAATATTGAA TAATATGCTATTGAATAATAACAATAGTGCTCGATATAAGAGCTTCCATAGGCTGTAGGG GTTTCCCCTTACCCACTTGGATGTAATATTGAATGGTTTTTTAAATTACTTTTACGAAGG CATTGTCCGTTTCCCCTTACTCACTTATGTGAGTGGTTTCTCAAATTCTCTTCTCTCCCC TCCTTTTAACCTGAACATCCATGACCGTTAACCCCCCCCCCCCCCCCCACCCTCTTTTGC TTCCTTCACTTG
