Phosphatase GeneID SpurP124

SpurP124, SpurP125, SpurP126, Spur200 are partially identical in protein sequence. To find out whether they are encoded by different genes:

BLAT the four sequences. SpurP124 is encoded by Scaffold67922 + Scaffold86115/Scaffold20002; SpurP125 is encoded by Scaffold86115/Scaffold20002; SpurP126 is encoded by Scaffold86115; SpurP200 is encoded by Scaffold52488.

Below are BLAT results:

ACTIONS QUERY SCORE START END QSIZE IDENTITY CHRO STRAND START END SPAN

browser details SpurP124 925 1 309 448 100.0% Scaffold67922 +- 2510 5486 2977

browser details SpurP124 913 1 309 448 99.4% Scaffold52488 ++ 158719 162171 3453

browser details SpurP124 412 311 448 448 100.0% Scaffold86115 +- 132767 134495 1729

browser details SpurP124 412 311 448 448 100.0% Scaffold20002 ++ 4106 5826 1721

browser details SpurP125 415 1 139 139 100.0% Scaffold86115 +- 132767 134498 1732

browser details SpurP125 415 1 139 139 100.0% Scaffold20002 ++ 4103 5826 1724

browser details SpurP126 1752 10 601 601 99.8% Scaffold86115 +- 132767 227975 95209

browser details SpurP126 415 463 601 601 100.0% Scaffold20002 ++ 4103 5826 1724

browser details SpurP126 302 95 197 601 99.1% Scaffold33476 ++ 582 1307 726

browser details SpurP200 931 1 311 311 100.0% Scaffold52488 ++ 158719 162177 3459 *

browser details SpurP200 919 1 311 311 99.4% Scaffold67922 +- 2504 5486 2983

2. To find out whether Scaffold86115 and Scaffold20002 are identical, BLAT Scaffold86115: 132767-134498. They have slight differences:

ACTIONS QUERY SCORE START END QSIZE IDENTITY CHRO STRAND START END SPAN

browser details strPur2_dna 1732 1 1732 1732 100.0% Scaffold86115 + 132767 134498 1732

browser details strPur2_dna 1710 1 1732 1732 99.2% Scaffold20002 - 4103 5826 1724