Difference between revisions of "Notes of Sequenced Genomes"

From PhosphataseWiki
Jump to: navigation, search
(Created page with " === Amphimedon queenslandica === [http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Amphimedon_queenslandica/101/ NCBI annotation]")
 
(→‎Dictyostelium discoideum)
 
(11 intermediate revisions by one user not shown)
Line 1: Line 1:
  
−
=== Amphimedon queenslandica ===
+
=== ''Amphimedon queenslandica'' ===
−
[http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Amphimedon_queenslandica/101/ NCBI annotation]
+
* [http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Amphimedon_queenslandica/101/ NCBI genome annotation]. Assembly accession GCF_000090795.1. The RefSeq genome records for Amphimedon queenslandica were annotated by the NCBI Eukaryotic Genome Annotation Pipeline.
 +
* [http://genome.jgi-psf.org/pages/dynamicOrganismDownload.jsf?organism=AmpqueaRenierasp JGI]. It looks like only image data is available.
 +
* [http://metazoa.ensembl.org/info/website/ftp/index.html Ensembl genomes]. Assembly accession  GCA_000090795.1.
 +
 
 +
=== ''Dictyostelium discoideum'' ===
 +
* [http://www.ncbi.nlm.nih.gov/genome/56 NCBI genome annotation]. Assembly accession [http://www.ncbi.nlm.nih.gov/genome/56?genome_assembly_id=22720 GCA_000004695.1] (dicty_2.7) (Dictyostelium discoideum AX4).
 +
* [http://dictybase.org/Downloads/ DictyBase.org].
 +
 
 +
=== ''Strongylocentrotus purpuratus'' ===
 +
* [http://www.ncbi.nlm.nih.gov/genome/annotation_euk/Strongylocentrotus_purpuratus/101/#AssembliesReport NCBI genome annotation]. Assembly accession GCF_000002235.4 (spur_4.2) annotated by the NCBI Eukaryotic Genome Annotation Pipeline.
 +
* [http://www.spbase.org/SpBase/download/ SpBase.org].
 +
 
 +
=== ''Monosiga brevicollis'' ===
 +
* [http://www.ncbi.nlm.nih.gov/genome/?term=Monosiga+brevicollis NCBI annotation]. Assembly accession GCA_000002865.1 (''Monosiga brevicollis'' MX1).
 +
* [http://genome.jgi-psf.org/Monbr1/Monbr1.home.html JGI].
 +
 
 +
=== ''Nematostella vectensis'' ===
 +
* [http://www.ncbi.nlm.nih.gov/genome/?term=Nematostella+vectensis NCBI genome annotation]. Assembly accession [http://www.ncbi.nlm.nih.gov/genome/230?genome_assembly_id=28590 GCA_000209225.1] (ASM20922v1).
 +
* [http://genome.jgi-psf.org/Nemve1/Nemve1.home.html JGI].

Latest revision as of 20:59, 31 August 2015

Amphimedon queenslandica

  • NCBI genome annotation. Assembly accession GCF_000090795.1. The RefSeq genome records for Amphimedon queenslandica were annotated by the NCBI Eukaryotic Genome Annotation Pipeline.
  • JGI. It looks like only image data is available.
  • Ensembl genomes. Assembly accession GCA_000090795.1.

Dictyostelium discoideum

Strongylocentrotus purpuratus

Monosiga brevicollis

Nematostella vectensis

Retrieved from "http://phosphatome.net/wiki/index.php?title=Notes_of_Sequenced_Genomes&oldid=2844"