Gene RTR1-2 in Nematostella vectensis

Gene expression:

Classification

Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.

Level Class Gene list Wiki page
Fold RTR1
Superfamily RTR1
Family RTR1
Subfamily RTR1
Protein sequence
ID Type Fasta BLAST phosphatome Note
NvecP155_AA protein Get Run
NvecP155_AA_74-149 phosphatase_domain Get Run
Domains
Summary
Details
Domain Domain Description Range Significance Score Source Profile Range (length) Alignment
RPAP2_Rtr1 Rtr1/RPAP2 family 75-149 3.3e-27 84.3 Pfam-A 2-79 (79) alignment
Range on Protein: 75-149
Range on HMM: 2-79/79.0
GNYITHRHYSDVVTERFIIKICGYPLCPKSLTNIP-KQTFKISTRTNRVYDITERK--CFCSNICYKASKFYESQLDE
 ...|...|.|||.|| | | ||||||..||.| . ||.|.||.....||......  .|||. |..||.... ||.|
lrlltkstyrdvveERninklCGYplCsnslknasgkqrfeisskekkvyeredeeeekFCSkaCaeaslalraqlse

RPAP2_Rtr1 Rtr1/RPAP2 family 75-149 3.3e-27 84.3 In-house 2-79 (79) alignment
Range on Protein: 75-149
Range on HMM: 2-79/79.0
GNYITHRHYSDVVTERFIIKICGYPLCPKSLTNIP-KQTFKISTRTNRVYDITERK--CFCSNICYKASKFYESQLDE
 ...|...|.|||.|| | | ||||||..||.| . ||.|.||.....||......  .|||. |..||.... ||.|
lrlltkstyrdvveERninklCGYplCsnslknasgkqrfeisskekkvyeredeeeekFCSkaCaeaslalraqlse

subfamily_RTR1_pd Subfamily RTR1 76-149 3.7e-37 116.2 In-house 1-74 (74) alignment
Range on Protein: 76-149
Range on HMM: 1-74/74.0
NYITHRHYSDVVTERFIIKICGYPLCPKSLTNIPKQTFKISTRTNRVYDITERKCFCSNICYKASKFYESQLDE
...|..||||||.||.| |.||||||.|||..|.||.|||||....||||||||.|||. ||||||||.|||.|
rlltpdhysdvveeRsinkrCGYPlCskslekiakqkfkistkekkvyditerkkfCskecykaskfyrsqlse