Phosphatome Computational Tools and Resources
Contents
PTP.cshl
PTP.cshl focuses on protein tyrosine phosphatases. It was launched in 2011 and provided a most complete census on human protein tyrosine phosphatases [1]. However, the content of the web site seems not updated since 2005.
PhosphaBase
PhosphaBase (PhB) is a database of protein phosphatases and contains information about their protein sequences [2]. It is not updated any more, though.
DEPOD
DEPOD is the human DEPhOsphorylation Database is a manually curated database collecting human active phosphatases, their experimentally verified protein and non-protein substrates and dephosphorylation site information, and pathways in which they are involved. Link
HuPho
PTP-central
PTP-central focuses on protein tyrosine phosphatases. It uses the same classification schema as the landmark work of Alonso et al. [3]. It comes with a tool (Y-Phosphatomer) to scan protein tyrosine phosphatases from genomes, and updated the total number of human protein tyrosine phosphatase to 109 [4].
GeneNet™ Phosphatase shRNA Library
GeneNet™ Phosphatase shRNA Library provides a list of 244 phosphatases, but some genes on the list are probably not phosphatases, such as discs and speedy homolog A, SIRPA and etc.
References
Error fetching PMID 11585896:
Error fetching PMID 15186772:
Error fetching PMID 15558746:
- Error fetching PMID 11585896:
- Error fetching PMID 15558746:
- Error fetching PMID 15186772:
- Error fetching PMID 23911837:
