Gene expression:
Classification
Phosphatases were first clustered by sequence similarity in the phosphatase domain, and additional information from domains outside of the catalytic domain, from evolutionary conservation, and from known functions was added. The result is a hybrid classification, in which no criterion is universally satisfied, but aims to be of practical use to a range of phosphatase interests. The classification grows as new phosphatomes are sequenced.
Protein sequence
Domains
Summary
Details
Domain | Domain Description | Range | Significance | Score | Source | Profile Range (length) | Alignment | ||
---|---|---|---|---|---|---|---|---|---|
subfamily_CUT_pd | Subfamily CUT | 20-83 | 1.5e-06 | 17.9 | In-house | 16-85 (391) | alignment | ||
Range on Protein: 20-83
Range on HMM: 16-85/391.0
DSIDTFIFDCDGVLWIADTIVPGAIETLNYLRQTLGK---KILFVTNNSTKTRQQFLEKI---KSFNIEA
.| ....| |||| ..|.| | |. | . |. ..|.||.. | .. ||. ....|
assfgivlDiDGvLlRgkkvipaakealklledkkgelkvPvvfltnggnftekekaeklsekLdvevda
|
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Hydrolase | haloacid dehalogenase-like hydrolase | 22-260 | 4.5e-13 | 41.4 | Pfam-A | 1-213 (215) | alignment | ||
Range on Protein: 22-260
Range on HMM: 1-213/215.0
IDTFIFDCDGVLWIADTIV--PGAIETLNYLRQT-------LGKKILFVTNNSTKT--RQQFLEKIkSFNIEAFIDEVygssY-GAAIYLNQINFP-KET
|.|..||..|.|. | .|. . |...... .||.. ... ... . |.. | .....|.. . | ...... .
iktvvfDktGTLtegepsvallgnkaalalaaaletgsehpigkavvaaakanstrggltgfatfi.grgvsgkvdgi....vlgnpewmtalglrviap
KKVFIIGehglekelndqnfktikeinklK----------DgldsvqntaidkdvGAVIVGMDTQL--TFQKATYAHMCIKEIEGCLFIAT--NPDTSYP
..| .| |...|. .. ..| | .|| ....| ||.|
dlvaaeg......................qskgrtvvvvav..............qaralgviafadpvkpeaaeavasLkeaGievvlltgdnpetaea
VKNEKTLpgAGSIVAMIQTstgvkpitiGKPETLLLDVILKKDNLNPERTLFVGDRLdTDIAFAVN
. .. . ..|.| . |||| |. .... ...|.....|||.. .|.... .
iakqagi..edslvfaevv.........gkPepklfvaaieeLqidpgevamvGDgv.nDapalaa
|
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subfamily_PGP_pd | Subfamily PGP | 24-299 | 3.1e-103 | 335.9 | In-house | 1-277 (279) | alignment | ||
Range on Protein: 24-299
Range on HMM: 1-277/279.0
TFIFDCDGVLWIADTIVPGAIETLNYLRqTLGKKILFVTNNSTKTRQQFLEKIKSFNIE-AFIDEVYGSSYGAAIYLNQinfPKETKKVFIIGEHGLEKE
|..||||||||. .|..|||.|.||.|. .||||.|||||||||.|...|.|.|....| .|.. |.. .| ||.| |..|||...||.||..|
tvlfDcDGVlWlgetaipgaaealnaLk.klgKkvlfvtNnstksreellkkfkklgfekvkeeeilssaaaiadyLkq...kkfekkvyvlgeeglkee
LNDQNFKTIK-EINKLKDGLD--SVQNTAIDKDVGAVIVGMDTQLTFQKATYAHMCIKEIEgCLFIATNPDTSYPVKNEKTLPGAGSIVAMIQTSTGVKP
|......... . .|||| || |.....|||||||.||.|..|...| ..|.....| | .||.||| |. .|.|.|...|||||.||.|....| ||
LkeagiellgtgpeklkdeldedfveelkldkdvgAVvvgvdeklsyakllkAanyLrepe.vlflatneDallplkkevvipgaGslvaaieaasgrkp
ITIGKPETLLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTGISKLNEINNIDS--KINPNYYTNTIADLLP
...|||..|||...|.| ...|||||..||||.|||.|. | |...||||.|..||.....|.. | .|.||....||||.
lvlGKPnelllelllekeeidpertlmiGDrlktDilfgkncGlqtLlvlsGvtkledveeikkeeklvPdyyldsladlle
|
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Chronophin_1 | 24-298 | 1.7e-72 | 235.0 | In-house | 3-256 (261) | alignment | |||
Range on Protein: 24-298
Range on HMM: 3-256/261.0
TFIFDCDGVLWIADTIVPGAIETLNYLRQTlGKKILFVTNNSTKTRQQFLEKIKSFNIE-AFIDEVYGSSYGAAIYLNQinfPKETKKVFIIGEHGLEKE
....|.||||. ...|||| |... |.| ||..|||||||..||... ...| . .. . .|.. | . || .|.| .. . ||...||.|| ||
lvLlDldGVlikgeeavpgAaeliealkqa.gkevlfvtNnsrrtreelaarlkrlGldavaaeeifssalaaaallrq...qaakakvyvlGeeglrke
LNDQNFKTIKEINKlkdgldsvqntaidkDVGAVIVGMDTQLTFQKATYAHMCIKEieGCLFIATNPDTSYPVKNEkTLPGAGSIVAMIQTSTGVKPITI
|... .....| .. .| ||.||.| .|.|.| . | . |.. |.||.|||.|. | .. .||.||..|.... .| .|. .
lreaGlrlvdeped...............rveaVvvGydeelsfeklaeaialird..galfvatnrDptvPleeG.iaPgtGslaaaveaAsgreplvv
GKPETLLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTGISKLNEINNIDSKINPNYYTNTIADLL
||||... . .|.| ...||.|. ||||||||| .. . |...||||||.|.|.|.... ... |... ..|||||
GKPepvmfeealekigadpeetvmvGDRldTDilagaraglstllvltGvseleeaqaykkdlrPdavvesiadll
|
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Chronophin_2 | 24-300 | 6e-67 | 216.8 | In-house | 2-279 (282) | alignment | |||
Range on Protein: 24-300
Range on HMM: 2-279/282.0
TFIFDCDGVLWIADTIVPGAIETLNYLRQtLGKKILFVTNNSTKTRQQFLEKIKSFNIEA-FIDEVYGSSYGAAIYLNQinFPKETKKVFIIGEHGLEKE
. .||||||.| ...|.|| | .. | . .||..||||||||..|... .|. . . .... |.| .| || . .. |||.|| .|| ||
nvlfdcdgviwngekavagapevvsrlar.agknvlfvtnnstrarenyvlkfarlgfadvaaeqifssaycsaaylrd..vadvrgkvfviggeglrke
LNDQNFKTIKEINKLKdglDSVQNTAIDKDVGAVIVGMDTQLTFQKATYAHMCIKEIEgCLFIATNPDTSYPVKNEKTLPGAGSIVAMIQTSTGVKPITI
|.. . ... .. . |. ..| | || ||.|| | .||| | . | ... . ||..||..| .|... . .||.||. | ..|..| | . |
lreagvpvvedadeqe...asiydcaldpdvravlvgydekltflklakacaylrdad.clllatdrdpwhplsdgritpgsgsltaaletasgrkatvi
GKPETLLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTGISKLNEINNIDS-------KINPNYYTNTIADLLPS
||| ... | .. ...| |.|..||||.||| | | |. ..| |||.|.|.| .. . .. |.|. ..|||||..
gkpsrfmfecissqfsvdparslmigdrletdilfgsncglstvltltgvssleeaqeysdsqlaeqrdlvpdyvvesiadllea
|
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Subfamily.CECR5.protein | 24-80 | 3e-06 | 16.9 | In-house | 22-84 (393) | alignment | |||
Range on Protein: 24-80
Range on HMM: 22-84/393.0
TFIFDCDGVLWIADTIVPGAIETLNYLRQTLGK---KILFVTNNSTKTRQQFLEKI---KSFN
....| |||| ..|.| | |. | . |. ..|.||.. | .. ||. ..
givlDiDGvLlRgkkvipaakealklledkkgelkvPvvfltnggnftekekaeklsekLdve
|
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Hydrolase_6 | Haloacid dehalogenase-like hydrolase | 25-129 | 1.3e-29 | 93.6 | Pfam-A | 1-101 (101) | alignment | ||
Range on Protein: 25-129
Range on HMM: 1-101/101.0
FIFDCDGVLWIADTIVPGAIETLNYLRQTlGKKILFVTNNSTKTRQQFLEKIKSFNIEAFIDEVYGSSYGAAIYLNQINFpkeTKKVFIIGEHGLEKELN
|.||.||||| |...||| |.|. ||.. ||.....||||.|.......|........ ..|. |.. || ||..... |||..||| ||..||.
flfDvdGvLwrgdkaipgaaealkalraa.gkpvvllTNnsskseeeyakkleklgvdvteeqvvtsataaaeylkkrka...dkkvlvigeeglreelk
DQNFK
. .||
eaGfk
|
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subfamily_LHPP_pd | Subfamily LHPP | 25-271 | 1.5e-28 | 91.2 | In-house | 1-219 (227) | alignment | ||
Range on Protein: 25-271
Range on HMM: 1-219/227.0
FIFDCDGVLWIADTIVPGAIETLNYLRQTlGKKILFVTNNSTKTRQQFLEKIKSFNIEAFIDEVYGSSYGAAIYLNQINFpketKKVFIIGEHGLEKeLN
.. | |||.. |. .|||.| |. |||. |.|. ||||.. ..... .|... . .. .|.. | |. .|.. . ...... .. |. ..
vllDlsGvlhnedaaipgavealkrLrqa.gvkvrfvtNttkeskralverLirlgfdveeeeiftsleaarqllrerkl....rpyllveddveed.fe
DQNFKTiKeinklkdgldsvqntaidkdvGAVIVGMD-TQLTFQKATYAHMCIKEIEGCLFIATNPDTSYPVKNEkTLPGAGSIVAMIQTSTGVKPITIG
| . . . ||..| ...... . |. ..|... || |.. | |. |.|. |. .. .|||| .|
didtdk.p.....................navviglapesfeyetlnqafrllleakkakliainkgkyykrkdG.lalgpGafvkaleyatgvkaevvG
KPETLLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTG
||. |. . |.. ...||. . .|| . |. |.. |.|..|| ||
KPsalffekaleelgvdpeeavmiGDdvedDveGAlkaGlrgvlVktG
|
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Hydrolase_like | HAD-hyrolase-like | 222-297 | 1.6e-16 | 51.4 | Pfam-A | 2-75 (75) | alignment | ||
Range on Protein: 222-297
Range on HMM: 2-75/75.0
IGKPETLLLDVILKKDNLNPERTLFVGDRLDTDIAFAVNGGIRSLLVLTGISKLNEINNidSKINPNYYTNTIADL
.|||. ..| .|.. ...|.... .||.|.|||..| | ||||.|||||.|. . . .|..|.|. ......
lgKPnpgmydkalevlgappsevvmiGDslatDieaAnnaGirsilVltGvsreedlkl..akakpdyvvddleea
|